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Waves propagating through weakly disordered smooth linear media undergo a universal phenomenon called branched flow. Branched flow has been observed and studied experimentally in various systems by considering coherent waves. Recent…

Analysis of PDEs · Mathematics 2025-04-09 Josselin Garnier , Antonio Picozzi , Theo Torres

Accretion of mineralized thin wall-like structures via localized growth along their edges is observed in a range of physical and biological systems ranging from molluscan and brachiopod shells to carbonate-silica composite precipitates. To…

Soft Condensed Matter · Physics 2022-02-23 C. Nadir Kaplan , L. Mahadevan

We consider an edge-weighted uniform random graph with a given degree sequence (Repeated Configuration Model) which is a useful approximation for many real-world networks. It has been observed that the vertices which are separated from the…

Probability · Mathematics 2012-09-14 Bartlomiej Blaszczyszyn , Kumar Gaurav

In this work, we explore links between natural homology and persistent homology for the classification of directed spaces. The former is an algebraic invariant of directed spaces, a semantic model of concurrent programs. The latter was…

Algebraic Topology · Mathematics 2024-08-07 Cameron Calk , Eric Goubault , Philippe Malbos

Biological transport networks are highly optimized structures that ensure power-efficient distribution of fluids across various domains, including animal vasculature and plant venation. Theoretically, these networks can be described as…

Biological Physics · Physics 2025-08-01 Albert Alonso , Lars Erik J. Skjegstad , Julius B. Kirkegaard

A fundamental problem in network science is the normalization of the topological or physical distance between vertices, that requires understanding the range of variation of the unnormalized distances. Here we investigate the limits of the…

Discrete Mathematics · Computer Science 2021-02-18 Ramon Ferrer-i-Cancho , Carlos Gómez-Rodríguez , Juan Luis Esteban

Some dynamical properties present in a problem concerning the acceleration of particles in a wave packet are studied. The dynamics of the model is described in terms of a two-dimensional area preserving map. We show that the phase space is…

Chaotic Dynamics · Physics 2011-09-14 Diego F. M. Oliveira , Marko Robnik , Edson D. Leonel

We propose a simple mathematical model to describe the mechanical relaxation of cells within a curved epithelial tissue layer represented by an arbitrary curve in two-dimensional space. This model generalises previous one-dimensional models…

Cellular Automata and Lattice Gases · Physics 2025-01-09 Pascal R. Buenzli , Shahak Kuba , Ryan J. Murphy , Matthew J. Simpson

Randomly branching polymers with {\em annealed} connectivity are model systems for ring polymers and chromosomes. In this context, the branched structure represents transient folding induced by topological constraints. Here we present…

Statistical Mechanics · Physics 2016-11-03 Angelo Rosa , Ralf Everaers

Point containment queries for regions bound by watertight geometric surfaces, i.e., closed and without self-intersections, can be evaluated straightforwardly with a number of well-studied algorithms. When this assumption on domain geometry…

Computational Geometry · Computer Science 2026-01-28 Jacob Spainhour , David Gunderman , Kenneth Weiss

We study stochastic particle systems on a complete graph and derive effective mean-field rate equations in the limit of diverging system size, which are also known from cluster aggregation models. We establish the propagation of chaos under…

Probability · Mathematics 2021-07-21 Watthanan Jatuviriyapornchai , Stefan Grosskinsky

Core-periphery structure is a common property of complex networks, which is a composition of tightly connected groups of core vertices and sparsely connected periphery vertices. This structure frequently emerges in traffic systems, biology,…

Social and Information Networks · Computer Science 2019-05-28 Junteng Jia , Austin R. Benson

Due to the fact that the numbers of annually published papers have witnessed a linear growth in some citation networks, a geometric model is thus proposed to predict some statistical features of those networks, in which the academic…

Physics and Society · Physics 2016-07-07 Qi Liu , Zheng Xie , Engming Dong , Jianping Li

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

By generalizing a class of models recently introduced to account for protracted transients in biological systems, we identify a novel mechanism for hyperuniformity. In this model, competition of particles over a shared resource guides the…

Statistical Mechanics · Physics 2025-12-11 Tal Agranov , Natan Wiegenfeld , Omer Karin , Benjamin D. Simons

This paper presents a generalization of symplectic geometry to a principal bundle over the configuration space of a classical field. This bundle, the vertically adapted linear frame bundle, is obtained by breaking the symmetry of the full…

dg-ga · Mathematics 2015-06-25 J. K. Lawson

The margins within the geographic range of species are often specific in terms of ecological and evolutionary processes, and can strongly influence the species' reaction to climate change. One of the frequently observed features at range…

Populations and Evolution · Quantitative Biology 2020-02-28 R. Juhász , B. Oborny

Several biological tissues undergo changes in their geometry and in their bulk material properties by modelling and remodelling processes. Modelling synthesises tissue in some regions and removes tissue in others. Remodelling overwrites old…

Tissues and Organs · Quantitative Biology 2016-05-13 Pascal R. Buenzli

Generating accurate digital tree models from scanned environments is invaluable for forestry, agriculture, and other outdoor industries in tasks such as identifying biomass, fall hazards and traversability, as well as digital applications…

Computer Vision and Pattern Recognition · Computer Science 2023-03-03 Thomas Lowe , Joshua Pinskier

The modelling and analysis of biological systems has deep roots in Mathematics, specifically in the field of Ordinary Differential Equations. Alternative approaches based on formal calculi, often derived from process algebras or term…

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