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There is a rising interest in mapping trees using satellite or aerial imagery, but there is no standardized evaluation protocol for comparing and enhancing methods. In dense canopy areas, the high variability of tree sizes and their spatial…

Computer Vision and Pattern Recognition · Computer Science 2023-11-15 Dimitri Gominski , Ankit Kariryaa , Martin Brandt , Christian Igel , Sizhuo Li , Maurice Mugabowindekwe , Rasmus Fensholt

The ongoing explosion of genome sequence data is transforming how we reconstruct and understand the histories of biological systems. Across biological scales, from individual cells to populations and species, trees-based models provide a…

Populations and Evolution · Quantitative Biology 2025-12-08 Yun Deng , Shing H. Zhan , Yulin Zhang , Chao Zhang , Bingjie Chen

Asymptotics of the variances of many cost measures in random digital search trees are often notoriously messy and involved to obtain. A new approach is proposed to facilitate such an analysis for several shape parameters on random symmetric…

Combinatorics · Mathematics 2010-03-04 Hsien-Kuei Hwang , Michael Fuchs , Vytas Zacharovas

Reachability analysis is a powerful tool when it comes to capturing the behaviour, thus verifying the safety, of autonomous systems. However, general-purpose methods, such as Hamilton-Jacobi approaches, suffer from the curse of…

Optimization and Control · Mathematics 2022-10-27 Alessandro Alla , Peter M. Dower , Vincent Liu

The diffusion of minimally invasive, endovascular interventions motivates the development of visualization methods for complex vascular networks. We propose a planar representation of blood vessel trees which preserves the properties that…

Image and Video Processing · Electrical Eng. & Systems 2025-10-23 Guillaume Houry , Tom Boeken , Stéphanie Allassonnière , Jean Feydy

Metabolic modelling has entered a mature phase with dozens of methods and software implementations available to the practitioner and the theoretician. It is not easy for a modeller to be able to see the wood (or the forest) for the trees.…

Molecular Networks · Quantitative Biology 2018-09-26 Supreeta Vijayakumar , Max Conway , Pietro Lió , Claudio Angione

Pulmonary diseases rank prominently among the principal causes of death worldwide. Curing them will require, among other things, a better understanding of the complex 3D tree-shaped structures within the pulmonary system, such as airways,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-21 Kangxian Xie , Jiancheng Yang , Donglai Wei , Ziqiao Weng , Pascal Fua

We introduce a hybrid metaphor for the visualization of the reconciliations of co-phylogenetic trees, that are mappings among the nodes of two trees. The typical application is the visualization of the co-evolution of hosts and parasites in…

Data Structures and Algorithms · Computer Science 2017-09-01 Tiziana Calamoneri , Valentino Di Donato , Diego Mariottini , Maurizio Patrignani

We investigate vertex levels of containment in a random hypergraph grown in the spirit of a recursive tree. We consider a local profile tracking the evolution of the containment of a particular vertex over time, and a global profile…

Probability · Mathematics 2021-01-19 Joshua Sparks , Srinivasan Balaji , Hosam Mahmoud

Though the mediums for visualization are limited, the potential dimensions of a dataset are not. In many areas of scientific study, understanding the correlations between those dimensions and their uncertainties is pivotal to mining useful…

Astrophysics · Physics 2009-02-25 Steve Haroz , Kwan-Liu Ma , Katrin Heitmann

A cluster tree provides a highly-interpretable summary of a density function by representing the hierarchy of its high-density clusters. It is estimated using the empirical tree, which is the cluster tree constructed from a density…

Statistics Theory · Mathematics 2017-02-14 Jisu Kim , Yen-Chi Chen , Sivaraman Balakrishnan , Alessandro Rinaldo , Larry Wasserman

A method for creating a forest of model trees to fit samples of a function defined on images is described in several steps: down-sampling the images, determining a tree's hyperplanes, applying convolutions to the hyperplanes to handle small…

Machine Learning · Computer Science 2026-01-28 William Ward Armstrong , Hongyi Li , Jun Xu

Dimensionality reduction is often used as an initial step in data exploration, either as preprocessing for classification or regression or for visualization. Most dimensionality reduction techniques to date are unsupervised; they do not…

Machine Learning · Statistics 2020-06-17 Jake S. Rhodes , Adele Cutler , Guy Wolf , Kevin R. Moon

The varying-coefficient model is a strong tool for the modelling of interactions in generalized regression. It is easy to apply if both the variables that are modified as well as the effect modifiers are known. However, in general one has a…

Methodology · Statistics 2017-05-25 Moritz Berger , Gerhard Tutz , Matthias Schmid

We present a holistic, topology-based visualization technique for spatial time series data based on an adaptation of Fuzzy Contour Trees. Common analysis approaches for time dependent scalar fields identify and track specific features. To…

Human-Computer Interaction · Computer Science 2021-07-28 Anna-Pia Lohfink , Frederike Gartzky , Florian Wetzels , Luisa Vollmer , Christoph Garth

Trees are key components of the terrestrial biosphere, playing vital roles in ecosystem function, climate regulation, and the bioeconomy. However, large-scale monitoring of individual trees remains limited by inadequate modelling. Available…

Computer Vision and Pattern Recognition · Computer Science 2025-09-01 Dimitri Gominski , Martin Brandt , Xiaoye Tong , Siyu Liu , Maurice Mugabowindekwe , Sizhuo Li , Florian Reiner , Andrew Davies , Rasmus Fensholt

Various structures in human physiology follow a treelike morphology, which often expresses complexity at very fine scales. Examples of such structures are intrathoracic airways, retinal blood vessels, and hepatic blood vessels. Large…

Image and Video Processing · Electrical Eng. & Systems 2022-09-23 Hao Li , Zeyu Tang , Yang Nan , Guang Yang

The magnitude of Pearson correlation between two scalar random variables can be visually judged from the two-dimensional scatter plot of an independent and identically distributed sample drawn from the joint distribution of the two…

Methodology · Statistics 2023-03-14 Shanjun Mao , Xiaodan Fan , Jie Hu

Multimodal image registration plays a key role in creating digital patient models by combining data from different imaging techniques into a single coordinate system. This process often involves multiple sequential and interconnected…

Computer Vision and Pattern Recognition · Computer Science 2025-05-23 Agnieszka Anna Tomaka , Dariusz Pojda , Michał Tarnawski , Leszek Luchowski

Contour trees describe the topology of level sets in scalar fields and are widely used in topological data analysis and visualization. A main challenge of utilizing contour trees for large-scale scientific data is their computation at scale…

Computational Geometry · Computer Science 2024-10-01 Mingzhe Li , Hamish Carr , Oliver Rübel , Bei Wang , Gunther H. Weber