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Related papers: Semiflexible Polymer Dynamics with a Bead-Spring M…

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We study the dynamics of a single semiflexible filament coupled to a Hookean spring at its boundary. The spring produces a fluctuating tensile force on the filament, whose value depends on the filament's instantaneous end-to-end length. The…

Soft Condensed Matter · Physics 2020-12-30 Jonathan Kernes , Alex J. Levine

We propose a dynamical model for non-specific DNA-protein interaction, which is based on the 'bead-spring' model previously developed by other groups, and investigate its properties using Brownian Dynamics simulations. We show that the…

Biological Physics · Physics 2009-01-14 Ana-Maria Florescu , Marc Joyeux

Polydispersity is inevitable in industrially produced polymers. Established theories of polymer dynamics and rheology, however, were mostly built on monodisperse linear polymers. Dynamics of polydisperse polymers is yet to be fully explored…

Soft Condensed Matter · Physics 2021-06-29 Oluseye Adeyemi , Shiping Zhu , Li Xi

We present using simple scaling arguments and one step replica symmetry breaking a theory for the localization of semiflexible polymers in a quenched random environment. In contrast to completely flexible polymers, localization of…

Soft Condensed Matter · Physics 2009-11-10 Arti Dua , Thomas A. Vilgis

We study a blend of two kinds of homopolymers with tendency for segragation. Cross-links between the chains of different kinds do not allow macrophase separation. Instead microphase structure appears. Starting from a microscopic model we…

Condensed Matter · Physics 2007-05-23 C. D. Sfatos , A. M. Gutin , E. I. Shakhnovich

We study the adsorption of semiflexible polymers such as polyelectrolytes or DNA on planar and curved substrates, e.g., spheres or washboard substrates via short-range potentials using extensive Monte-Carlo simulations, scaling arguments,…

Soft Condensed Matter · Physics 2015-08-19 Tobias A. Kampmann , Horst-Holger Boltz , Jan Kierfeld

We demonstrate that a semiflexible bundle of wormlike chains exhibits a state-dependent bending stiffness that alters fundamentally its scaling behavior with respect to the standard wormlike chain. We explore the equilibrium conformational…

Statistical Mechanics · Physics 2007-07-26 Claus Heussinger , Mark Bathe , Erwin Frey

The persistence length of semiflexible polymers and one-dimensional fluid membranes is obtained from the renormalization of their bending rigidity. The renormalized bending rigidity is calculated using an exact real-space functional…

Statistical Mechanics · Physics 2012-05-02 Petra Gutjahr , Reinhard Lipowsky , Jan Kierfeld

We develop a theory describing density profile of the semi-flexible polymers absorbed onto a planar surface. The theoretical analysis consists of two parts. As a first part, we calculate a density profile of the adsorbed polymers by…

Soft Condensed Matter · Physics 2013-07-09 F. Semeriyanov , A. I. Chervanyov , G. Heinrich

Ring polymers exhibit unique flow properties due to their closed chain topology. Despite recent progress, we have not yet achieved a full understanding of the nonequilibrium flow behavior of rings in nondilute solutions where intermolecular…

In a preceding paper, we have presented a general lattice formulation of the dynamic self-consistent field (DSCF) theory for inhomogeneous, unentangled homopolymer fluids. Here we apply the DSCF theory to study both transient and…

Soft Condensed Matter · Physics 2007-05-23 Maja Mihajlovic , Tak Shing Lo , Yitzhak Shnidman

We consider the well-posedness of a model for a flow-structure interaction. This model describes the dynamics of an elastic flexible plate with clamped boundary conditions immersed in a supersonic flow. A perturbed wave equation describes…

Analysis of PDEs · Mathematics 2012-06-01 Igor Chueshov , Irena Lasiecka , Justin T. Webster

The dynamical properties of entangled polymers originate from the dynamic constraints due to the uncrossability between polymer chains. We propose a highly coarse-grained simulation model with transient bonds for such dynamically…

Soft Condensed Matter · Physics 2019-01-10 Takashi Uneyama

We investigate the addition of stiffness to the lattice model of hydrogen-bonded polymers in two and three dimensions. We find that, in contrast to polymers that interact via a homogeneous short-range interaction, the collapse transition is…

Soft Condensed Matter · Physics 2009-11-13 J Krawczyk , AL Owczarek , T Prellberg

We introduce a novel coarse-grained bead-spring model for flexible polymers to systematically examine the effects of an adjusted bonded potential on the formation and stability of structural macrostates in a thermal environment. The density…

Biological Physics · Physics 2019-02-11 Kai Qi , Benjamin Liewehr , Tomas Koci , Busara Pattanasiri , Matthew J. Williams , Michael Bachmann

We describe some recent results concerning the statistical properties of a self-interacting polymer stretched by an external force. We concentrate mainly on the cases of purely attractive or purely repulsive self-interactions, but our…

Probability · Mathematics 2011-08-25 Dmitry Ioffe , Yvan Velenik

The flexibility of short DNA chains is investigated via computation of the average correlation function between dimers which defines the persistence length. Path integration techniques have been applied to confine the phase space available…

Soft Condensed Matter · Physics 2018-10-19 Marco Zoli

We generalize a recently investigated lattice model of semiflexible polymers formed under equilibrium polymerization in a solution and conduct a comprehensive investigation of its melting properties. The model is characterized by six…

Condensed Matter · Physics 2007-05-23 Sagar S. Rane , P. D. Gujrati

To study the cooling behavior and the glass transition of polymer melts in bulk and with free surfaces a coarse-grained weakly semi-flexible polymer model is developed. Based on a standard bead spring model with purely repulsive…

Soft Condensed Matter · Physics 2019-09-09 Hsiao-Ping Hsu , Kurt Kremer

The local dynamical features of a PEO melt studied by MD simulations are compared to two model chain systems, namely the well-known Rouse model as well as the semiflexible chain model (SFCM) that additionally incorporates chain stiffness.…

Soft Condensed Matter · Physics 2015-05-19 Diddo Diddens , Martin Brodeck , Andreas Heuer
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