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We generalize a recently investigated lattice model of semiflexible polymers formed under equilibrium polymerization in a solution and conduct a comprehensive investigation of its melting properties. The model is characterized by six…

Condensed Matter · Physics 2007-05-23 Sagar S. Rane , P. D. Gujrati

The behaviour of many dynamic real phenomena shows different phases, with each one following a sigmoidal type pattern. This requires studying sigmoidal curves with more than one inflection point. In this work, a diffusion process is…

Statistics Theory · Mathematics 2024-01-31 Patricia Román-Román , Juan José Serrano-Pérez , Francisco Torres-Ruiz

Although the notion of mechanical noise is expected to play a key role in the non-linear rheology of athermally sheared amorphous systems, its characterization has so far remained elusive. Here, we show using molecular dynamic simulations…

Soft Condensed Matter · Physics 2015-08-27 Francesco Puosi , Julien Olivier , Kirsten Martens

The number of allowed configurations of a polymer is reduced by the presence of a repulsive surface resulting in an entropic force between them. We develop a method to calculate the entropic force, and detailed pressure distribution, for…

Statistical Mechanics · Physics 2014-02-11 Yosi Hammer , Yacov Kantor

Failure and flow of amorphous materials are central to various phenomena including earthquakes and landslides. There is accumulating evidence that the yielding transition between a flowing and an arrested phase is a critical phenomenon, but…

Soft Condensed Matter · Physics 2017-07-31 Jie Lin , Matthieu Wyart

In conflict with standard notions of thermodynamics, mesoscopically-sized inclusions (``clusters'') of a solute-rich liquid have been observed in equilibrated solutions of proteins and other molecules. According to a complexation scenario…

Soft Condensed Matter · Physics 2025-09-11 Ilya Davydov , Vassiliy Lubchenko

In this paper we develop a model for nematic alignment of self-propelled rods interacting through binary collisions. We avoid phenomenological descriptions of rod interaction in favor of rigorously using a set of microscopic-level rules.…

Biological Physics · Physics 2022-10-10 Misha Perepelitsa , Ilya Timofeyev , Patrick Murphy , Oleg A. Igoshin

We study the optimal control of mean-field systems with heterogeneous and asymmetric interactions. This leads to considering a family of controlled Brownian diffusion processes with dynamics depending on the whole collection of marginal…

Probability · Mathematics 2024-07-29 Anna De Crescenzo , Marco Fuhrman , Idris Kharroubi , Huyên Pham

The surface tension of interacting polymers in a good solvent is calculated theoretically and by computer simulations for a planar wall geometry and for the insertion of a single colloidal hard-sphere. This is achieved for the planar wall…

Soft Condensed Matter · Physics 2016-08-31 A. A. Louis , P. G. Bolhuis , E. J. Meijer , J. P. Hansen

Important gaps remain in our understanding of the thermodynamics and statistical physics of self-gravitating systems. Using mean field theory, here we investigate the equilibrium properties of several spherically symmetric model systems…

Statistical Mechanics · Physics 2009-10-31 Peter J. Klinko , Bruce N. Miller

Solutions of semiflexible polymers confined by repulsive planar walls are studied by density functional theory and Molecular Dynamics simulations, to clarify the competition between the chain alignment favored by the wall and the depletion…

Soft Condensed Matter · Physics 2016-05-25 Sergei A. Egorov , Andrey Milchev , Peter Virnau , Kurt Binder

We consider the mean field Fokker-Planck equation subject to nonlinear no-flux boundary conditions, which necessarily arise when subjecting a system of Brownian particles interacting via a pair potential in a bounded domain. With the…

Numerical Analysis · Mathematics 2022-03-30 R. D. Mills-Williams , B. D. Goddard , G. A. Pavliotis

We have studied the conformational and scaling behaviors of a flexible dendrimer immersed in athermal or good solvents. A self-consistent field theory combined with a pre-averaged excluded volume potential representing the two-body…

Soft Condensed Matter · Physics 2018-08-30 Meng Shi , Yingzi Yang , Feng Qiu

This paper is a part of an ongoing study on the diamagnetic behavior of a 3-dimensional quantum gas of non-interacting charged particles subjected to an external uniform magnetic field together with a random electric potential. We prove the…

Mathematical Physics · Physics 2015-06-03 Philippe Briet , Baptiste Savoie

Several mean-field theories predict that Hessian matrices of amorphous solids can be written by using the random matrix in the limit of the large spatial dimensions $d\to\infty$. Motivated by these results, we here propose a way to map a…

Disordered Systems and Neural Networks · Physics 2022-08-31 Harukuni Ikeda , Masanari Shimada

Mean-field Ring Polymer Molecular Dynamics (MF-RPMD) offers a computationally efficient method for the simulation of reaction rates in multi-level systems. Previous work has established that, to model a nonadiabatic state-to-state reaction…

Chemical Physics · Physics 2024-05-09 Nathan London , Siyu Bu , Britta Ann Johnson , Nandini Ananth

The Dirichlet process mixture model and more general mixtures based on discrete random probability measures have been shown to be flexible and accurate models for density estimation and clustering. The goal of this paper is to illustrate…

Methodology · Statistics 2013-10-02 Ernesto Barrios , Antonio Lijoi , Luis E. Nieto-Barajas , Igor Prünster

We present a detailed theoretical study on the thermodynamic properties of impure quasi-one dimensional unconventional charge-, and spin-density waves in the framework of mean-field theory. The impurities are of the ordinary non-magnetic…

Strongly Correlated Electrons · Physics 2009-11-11 Andras Vanyolos , Balazs Dora , Kazumi Maki , Attila Virosztek

We construct a consistent dimer model having the same symmetry as its characteristic polygon. This produces examples of non-commutative crepant resolutions of non-toric non-quotient Gorenstein singularities in dimension 3.

Algebraic Geometry · Mathematics 2023-11-28 Akira Ishii , Álvaro Nolla de Celis , Kazushi Ueda

Emergent phenomena share the fascinating property of not being obvious consequences of the design of the system in which they appear. This characteristic is no less relevant when attempting to simulate such phenomena, given that the outcome…

Soft Condensed Matter · Physics 2014-11-26 D. C. Rapaport