Related papers: Lempel-Ziv Factorization May Be Harder Than Comput…
The suffix array is a fundamental data structure for many applications that involve string searching and data compression. Designing time/space-efficient suffix array construction algorithms has attracted significant attention and…
A gapped repeat is a factor of the form $uvu$ where $u$ and $v$ are nonempty words. The period of the gapped repeat is defined as $|u|+|v|$. The gapped repeat is maximal if it cannot be extended to the left or to the right by at least one…
Given a computable sequence of natural numbers, it is a natural task to find a G\"odel number of a program that generates this sequence. It is easy to see that this problem is neither continuous nor computable. In algorithmic learning…
Finding all maximal $k$-plexes on networks is a fundamental research problem in graph analysis due to many important applications, such as community detection, biological graph analysis, and so on. A $k$-plex is a subgraph in which every…
Sequence partition problems arise in many fields, such as sequential data analysis, information transmission, and parallel computing. In this paper, we study the following partition problem variant: given a sequence of $n$ items…
We give a near-optimal quantum algorithm for the longest common substring (LCS) problem between two run-length encoded (RLE) strings, with the assumption that the prefix-sums of the run-lengths are given. Our algorithm costs…
An alphabetic binary tree formulation applies to problems in which an outcome needs to be determined via alphabetically ordered search prior to the termination of some window of opportunity. Rather than finding a decision tree minimizing…
The theoretical aspects of four integer factorization algorithms are discussed in details in this note. The focus is on the performances of these algorithms on the subset of hard to factor balanced integers N = pq, p < q < 2p. The running…
In this paper we consider two problems concerning string factorisation. Specifically given a string $w$ and an integer $k$ find a factorisation of $w$ where each factor has length bounded by $k$ and has the minimum (the FmD problem) or the…
This paper presents a new semantic method for proving lower bounds in computational complexity. We use it to prove that maxflow, a PTIME complete problem, is not computable in polylogarithmic time on parallel random access machines (PRAMs)…
We consider the problem of computing the Maximal Exact Matches (MEMs) of a given pattern $P[1 .. m]$ on a large repetitive text collection $T[1 .. n]$, which is represented as a (hopefully much smaller) run-length context-free grammar of…
We study the complexity of a fundamental algorithm for fairly allocating indivisible items, the round-robin algorithm. For $n$ agents and $m$ items, we show that the algorithm can be implemented in time $O(nm\log(m/n))$ in the worst case.…
We revisit the mergeable dictionaries with shift problem, where the goal is to maintain a family of sets subject to search, split, merge, make-set, and shift operations. The search, split, and make-set operations are the usual well-known…
This paper delves into recent hardware implementations of the Lempel-Ziv 4 (LZ4) algorithm, highlighting two key factors that limit the throughput of single-kernel compressors. Firstly, the actual parallelism exhibited in single-kernel…
We describe an algorithm computing an optimal prefix free code from $N$ unsorted positive integer weights in time linear in the number of machine words holding those weights. This algorithm takes advantage of common non-algebraic…
We consider Conditional Random Fields (CRFs) with pattern-based potentials defined on a chain. In this model the energy of a string (labeling) $x_1...x_n$ is the sum of terms over intervals $[i,j]$ where each term is non-zero only if the…
In the paper, we focus on complexity of C5.0 algorithm for constructing decision tree classifier that is the models for the classification problem from machine learning. In classical case the decision tree is constructed in $O(hd(NM+N \log…
In this paper we present a new algorithm for solving linear programs that requires only $\tilde{O}(\sqrt{rank(A)}L)$ iterations to solve a linear program with $m$ constraints, $n$ variables, and constraint matrix $A$, and bit complexity…
In this paper, we revisit the classic problem of run generation. Run generation is the first phase of external-memory sorting, where the objective is to scan through the data, reorder elements using a small buffer of size M , and output…
Computing the {\em matching statistics} of a string $P[1..m]$ with respect to a text $T[1..n]$ is a fundamental problem which has application to genome sequence comparison. In this paper, we study the problem of computing the matching…