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A common type of cytoskeletal morphology involves multiple converging microbutubules with their minus ends collected and stabilized by a microtubule organizing center (MTOC) in the interior of the cell. This arrangement enables the…

Cell Behavior · Quantitative Biology 2023-01-04 Niranjan Sarpangala , Brooke Randell , Ajay Gopinathan , Oleg Kogan

We present a simple model for the bidirectional dynamics of actin bundles with alternating polarities in gliding assays with non-processive myosin motors. In the model, the bundle is represented as an elastic chain consisting of monomers…

Soft Condensed Matter · Physics 2015-05-19 Barak Gur , Oded Farago

We investigate stall force and polymerization kinetics of rigid protofilaments in a microtubule or interacting filaments in bundles under an external load force in the framework of a discrete growth model. We introduce the concecpt of…

Statistical Mechanics · Physics 2011-02-11 Jaroslaw Krawczyk , Jan Kierfeld

Bundles of filamentous polymers are primary structural components of a broad range of cytoskeletal structures, and their mechanical properties play key roles in cellular functions ranging from locomotion to mechanotransduction and…

Soft Condensed Matter · Physics 2010-02-23 Claus Heussinger , Felix Schueller , Erwin Frey

Microtubules are protein polymers that form "molecular highways" for long-range transport within living cells. Molecular motors actively step along microtubules to shuttle cellular materials between the nucleus and the cell periphery; this…

Biomolecules · Quantitative Biology 2016-10-06 Winnie H. Liang , Qiaochu Li , K. M. Rifat Faysal , Stephen J. King , Ajay Gopinathan , Jing Xu

Single kinesin molecular motors can processively move along a microtubule (MT) a few micrometers on average before dissociating. However, cellular length scales over which transport occurs are several hundred microns and more. Why seemingly…

Subcellular Processes · Quantitative Biology 2019-08-21 Keshav B. Patel , Shengtan Mao , M. Gregory Forest , Samuel K. Lai , Jay M. Newby

Before cell division, two identical copies of chromosomes are pulled apart by microtubule (MT) filaments that approach the chromosomes from the opposite poles a mitotic spindle. Connection between the MTs and the chromosomes are mediated by…

Biological Physics · Physics 2013-02-05 Blerta Shtylla , Debashish Chowdhury

In biological systems, molecular-scale forces and motions are pivotal for enabling processes like motility, shape change, and replication. These forces and motions are organized, amplified, and transmitted across macroscopic scales by…

Epithelial cell clusters often move collectively on a substrate. Mechanical signals play a major role in organizing this behavior. There are a number of experimental observations in these systems which await a comprehensive explanation.…

Biological Physics · Physics 2021-01-22 Youyuan Deng , Herbert Levine , Xiaoming Mao , Leonard M. Sander

Along a microtubule, certain active motors propel themselves in one direction whereas others propel themselves in the opposite direction. For example, the cargo transporting motor proteins dynein and kinesin propel themselves towards the…

Soft Condensed Matter · Physics 2016-04-01 Anton Souslov , Paul M. Goldbart

Inside cells, cargos such as vesicles and organelles are transported by molecular motors to their correct locations via active motion on cytoskeletal tracks and passive, Brownian diffusion. During the transportation of cargos, motor-cargo…

Soft Condensed Matter · Physics 2018-04-10 Supravat Dey , Kevin Ching , Moumita Das

Before a cell divides into two daughter cells, chromosomes are replicated resulting in two sister chromosomes embracing each other. Each sister chromosome is bound to a separate proteinous structure, called kinetochore (kt), that captures…

Biological Physics · Physics 2017-05-30 Ajeet K. Sharma , Blerta Shtylla , Debashish Chowdhury

Microtubules, the primary components of the chromosome segregation machinery, are stabilized by longitudinal and lateral non-covalent bonds between the tubulin subunits. However, the thermodynamics of these bonds and the microtubule…

Microtubules (MTs) are cytoplasmic protein polymers that are essential for fundamental cellular processes including the maintenance of cell shape, organelle transport and formation of the mitotic spindle. Microtubule dynamic instability is…

Biomolecules · Quantitative Biology 2014-04-09 Chunlei Li , Jun Li , Holly V. Goodson , Mark S. Alber

In many intracellular processes, the length distribution of microtubules is controlled by depolymerizing motor proteins. Experiments have shown that, following non-specific binding to the surface of a microtubule, depolymerizers are…

Biological Physics · Physics 2009-11-13 Bindu S. Govindan , Manoj Gopalakrishnan , Debashish Chowdhury

Microtubules (MTs) represent basic components of a cytoskeleton. The present work studies nonlinear dynamics of MTs assuming tangential oscillations of the dimers. We introduce a two component model and show that the dynamics of MTs can be…

Biological Physics · Physics 2023-02-06 Slobodan Zdravković , Slobodan Zeković

The transport of cargo particles which are pulled by several molecular motors in a cooperative manner is studied theoretically. The transport properties depend primarily on the maximal number, $N$, of motor molecules that may pull…

Subcellular Processes · Quantitative Biology 2007-05-23 Stefan Klumpp , Reinhard Lipowsky

Intracellular transport of vesicular cargos, organelles, and other macromolecules is an essential process to move large items through a crowded, and inhomogeneous cellular environment. In an effort to dissect the fundamental effects of…

Biomolecules · Quantitative Biology 2014-09-12 Leslie Conway , Jennifer L. Ross

Intracellular transport is based on molecular motors that pull cargos along cytoskeletal filaments. One motor species always moves in one direction, e.g. conventional kinesin moves to the microtubule plus end, while cytoplasmic dynein moves…

Subcellular Processes · Quantitative Biology 2008-07-04 Melanie J. I. Müller , Stefan Klumpp , Reinhard Lipowsky

A theoretical model of stabilization of a microtubule assembly due to microtubule-associated-proteins(MAP) is presented. MAPs are assumed to bind to the microtubule filaments, thus preventing their disintegration following hydrolysis and…

Subcellular Processes · Quantitative Biology 2012-08-27 Bindu S. Govindan , William B. Spillman,