Related papers: H-Representation of the Kimura-3 Polytope
Phylogenetic networks can represent evolutionary events that cannot be described by phylogenetic trees. These networks are able to incorporate reticulate evolutionary events such as hybridization, introgression, and lateral gene transfer.…
We characterize the angular polyspectra, of arbitrary order, associated with isotropic fields defined on the sphere S^2. Our techniques rely heavily on group representation theory, and specifically on the properties of Wigner matrices and…
Existing genetic programming (GP) methods are typically designed based on a certain representation, such as tree-based or linear representations. These representations show various pros and cons in different domains. However, due to the…
We introduce a derived representation scheme associated with a quiver, which may be thought of as a derived version of a Nakajima variety. We exhibit an explicit model for the derived representation scheme as a Koszul complex and by doing…
In this paper, the 2-category $\mathfrak{Rep}_{{\bf 2Mat}_{\mathbb{C}}}(\mathbb{G})$ of (weak) representations of an arbitrary (weak) 2-group $\mathbb{G}$ on (some version of) Kapranov and Voevodsky's 2-category of (complex) 2-vector spaces…
Phylogenetic trees provide a fundamental representation of evolutionary relationships, yet the combinatorial explosion of possible tree topologies renders inference computationally challenging. Classical approaches to characterizing tree…
For any rank $r$ oriented matroid $M$, a construction is given of a "topological representation" of $M$ by an arrangement of homotopy spheres in a simplicial complex which is homotopy equivalent to $S^{r-1}$. The construction is completely…
We consider the problem of representing multidimensional data where the domain of each dimension is organized hierarchically, and the queries require summary information at a different node in the hierarchy of each dimension. This is the…
We study a wide range of homologically-defined representations of surface braid groups and of mapping class groups of surfaces, including the Lawrence-Bigelow representations of the classical braid groups. These representations naturally…
Inside a product of projective spaces, we try to understand which Chow classes come from irreducible subvarieties. The answer is closely related to the theory of integer polymatroids. The support of a representable class can be (partially)…
Let G be the absolute Galois group of a global field. Let r1 and r2 be two p-adic, finite dimensional representations of G. Then there exists a finite number of primes q such that if the characteristic polynomials of r1(Frob_q) and…
Recent work has proven the existence of extreme inbreeding in a European ancestry sample taken from the contemporary UK population \cite{nature_01}. This result brings our attention again to a math problem related to inbreeding family trees…
Let $\sigma_1$ and $\sigma_2$ be commuting involutions of a semisimple algebraic group $G$. This yields a $Z_2\times Z_2$-grading of $\g=\Lie(G)$, $\g=\bigoplus_{i,j=0,1}\g_{ij}$, and we study invariant-theoretic aspects of this…
It is shown that, under some mild technical conditions, representations of prime numbers by binary quadratic forms can be computed in polynomial complexity by exploiting Schoof's algorithm, which counts the number of $\mathbb F_q$-points of…
We describe a new method of producing equations for the canonical component of representation variety of a knot group into $PSL_2(\mathbb{C})$. Unlike known methods, this one does not involve any polyhedral decomposition or triangulation of…
We consider the topology of real no $k$-equal spaces via the theory of cellular spanning trees. Our main theorem proves that the rank of the $(k-2)$-dimensional homology of the no $k$-equal subspace of $\mathbb{R}$ is equal to the number of…
Using local detailed balance we rewrite the Kirchhoff formula for stationary distribution of Markov jump processes in terms of a physically interpretable tree-ensemble. We use that arborification of path-space integration to derive a…
We extend the investigation of special toroidal compactifications of heterotic string theory for which the half-BPS states provide representations of subgroups of the Conway group. We also explore dual descriptions of these theories and…
Phylogenetic trees are the fundamental mathematical representation of evolutionary processes in biology. They are also objects of interest in pure mathematics, such as algebraic geometry and combinatorics, due to their discrete geometry.…
The cut polytope of a graph is an important object in several fields, such as functional analysis, combinatorial optimization, and probability. For example, Sturmfels and Sullivant showed that the toric ideals of cut polytopes are useful in…