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Adverse drug reactions (ADR) are widely concerning for public health issue. In this study we propose an original approach to detect ADRs using a feature matrix and feature selection. The experiments are carried out on the drug Simvastatin.…

Computational Engineering, Finance, and Science · Computer Science 2014-09-04 Yihui Liu , Uwe Aickelin

When a new treatment is considered for use, whether a pharmaceutical drug or a search engine ranking algorithm, a typical question that arises is, will its performance exceed that of the current treatment? The conventional way to answer…

Machine Learning · Computer Science 2016-10-27 Nir Rosenfeld , Yishay Mansour , Elad Yom-Tov

The dearth of prescribing guidelines for physicians is one key driver of the current opioid epidemic in the United States. In this work, we analyze medical and pharmaceutical claims data to draw insights on characteristics of patients who…

Machine Learning · Computer Science 2020-05-01 Chirag Nagpal , Dennis Wei , Bhanukiran Vinzamuri , Monica Shekhar , Sara E. Berger , Subhro Das , Kush R. Varshney

Drug promiscuity and polypharmacology are much discussed topics in pharmaceutical research. Drug repositioning applies established drugs to new disease indications with increasing success. As polypharmacology, defined a drug's ability to…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-16 Antonios Makris

Pharmacovigilance and clinical decision support systems utilize structured drug safety data to guide medical practice. However, existing datasets frequently depend on terminologies such as MedDRA, which limits their semantic reasoning…

Information Retrieval · Computer Science 2026-02-24 Mohammad Ashhad , Olga Mashkova , Ricardo Henao , Robert Hoehndorf

Molecular profiling data (e.g., gene expression) has been used for clinical risk prediction and biomarker discovery. However, it is necessary to integrate other prior knowledge like biological pathways or gene interaction networks to…

Genomics · Quantitative Biology 2016-09-22 Wenwen Min , Juan Liu , Shihua Zhang

Weak-strong consistency learning strategies are widely employed in semi-supervised medical image segmentation to train models by leveraging limited labeled data and enforcing weak-to-strong consistency. However, existing methods primarily…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Chaowei Chen , Xiang Zhang , Honglie Guo , Shunfang Wang

Adverse drug reaction (ADR) is widely concerned for public health issue. ADRs are one of most common causes to withdraw some drugs from market. Prescription event monitoring (PEM) is an important approach to detect the adverse drug…

Computational Engineering, Finance, and Science · Computer Science 2013-07-08 Yihui Liu , Uwe Aickelin

In recent years, there are many research cases for the diagnosis of Parkinson's disease (PD) with the brain magnetic resonance imaging (MRI) by utilizing the traditional unsupervised machine learning methods and the supervised deep learning…

Image and Video Processing · Electrical Eng. & Systems 2020-03-11 Xiaobo Zhang , Donghai Zhai , Yan Yang , Yiling Zhang , Chunlin Wang

Drug recommendation assists doctors in prescribing personalized medications to patients based on their health conditions. Existing drug recommendation solutions adopt the supervised multi-label classification setup and only work with…

Machine Learning · Computer Science 2022-10-12 Zhenbang Wu , Huaxiu Yao , Zhe Su , David M Liebovitz , Lucas M Glass , James Zou , Chelsea Finn , Jimeng Sun

Reinforcement learning (RL) has shown great success in estimating sequential treatment strategies which take into account patient heterogeneity. However, health-outcome information, which is used as the reward for reinforcement learning…

Machine Learning · Computer Science 2021-02-24 Aaron Sonabend-W , Nilanjana Laha , Ashwin N. Ananthakrishnan , Tianxi Cai , Rajarshi Mukherjee

Drug prescriptions are essential information that must be encoded in electronic medical records. However, much of this information is hidden within free-text reports. This is why the medication extraction task has emerged. To date, most of…

Computation and Language · Computer Science 2021-10-22 Ali Can Kocabiyikoglu , François Portet , Raheel Qader , Jean-Marc Babouchkine

A significant proportion of clinical physiologic monitoring alarms are false. This often leads to alarm fatigue in clinical personnel, inevitably compromising patient safety. To combat this issue, researchers have attempted to build Machine…

Machine Learning · Computer Science 2022-06-22 Arnab Dey , Mononito Goswami , Joo Heung Yoon , Gilles Clermont , Michael Pinsky , Marilyn Hravnak , Artur Dubrawski

Personalized medicine seeks to identify the causal effect of treatment for a particular patient as opposed to a clinical population at large. Most investigators estimate such personalized treatment effects by regressing the outcome of a…

Machine Learning · Statistics 2021-09-02 Eric V. Strobl , Shyam Visweswaran

Drug combination therapy is a well-established strategy for disease treatment with better effectiveness and less safety degradation. However, identifying novel drug combinations through wet-lab experiments is resource intensive due to the…

Machine Learning · Computer Science 2023-01-18 Zhihang Hu , Qinze Yu , Yucheng Guo , Taifeng Wang , Irwin King , Xin Gao , Le Song , Yu Li

Supervisory signals can help topic models discover low-dimensional data representations that are more interpretable for clinical tasks. We propose a framework for training supervised latent Dirichlet allocation that balances two goals:…

Machine Learning · Computer Science 2017-12-05 Michael C. Hughes , Gabriel Hope , Leah Weiner , Thomas H. McCoy , Roy H. Perlis , Erik B. Sudderth , Finale Doshi-Velez

Supervisory signals are a critical resource for training learning to rank models. In many real-world search and retrieval scenarios, these signals may not be readily available or could be costly to obtain for some queries. The examples…

Information Retrieval · Computer Science 2024-10-10 Xuyang Wu , Ajit Puthenputhussery , Hongwei Shang , Changsung Kang , Yi Fang

New Psychoactive Substances (NPS) are drugs that lay in a grey area of legislation, since they are not internationally and officially banned, possibly leading to their not prosecutable trade. The exacerbation of the phenomenon is that NPS…

Computation and Language · Computer Science 2016-09-22 Fabio Del Vigna , Marinella Petrocchi , Alessandro Tommasi , Cesare Zavattari , Maurizio Tesconi

Clinicians prescribe antibiotics by looking at the patient's health record with an experienced eye. However, the therapy might be rendered futile if the patient has drug resistance. Determining drug resistance requires time-consuming…

Artificial Intelligence · Computer Science 2023-03-09 Honglin Shu , Pei Gao , Lingwei Zhu , Zheng Chen

Repurposing existing drugs to treat new diseases is a cost-effective alternative to de novo drug development, but there are millions of potential drug-disease combinations to be considered with only a small fraction being viable. In silico…

Quantitative Methods · Quantitative Biology 2025-10-24 Austin Polanco , M. E. J. Newman