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This paper describes a method to efficiently retrieve protein database sequences similar to a query sequence, while allowing for significant numbers of mutations. We call this method SEQR for SEQuence Retrieval. This approach increases the…

Genomics · Quantitative Biology 2018-11-05 David I. Hurwitz , Lianyi Han , Lewis Y. Geer

In order to enhance the real-time performance of convolutional neural networks(CNNs), more and more researchers are focusing on improving the efficiency of CNN. Based on the analysis of some CNN architectures, such as ResNet, DenseNet,…

Computer Vision and Pattern Recognition · Computer Science 2018-03-16 Qiuyu Zhu , Ruixin Zhang

Neuronal circuits can learn and replay firing patterns evoked by sequences of sensory stimuli. After training, a brief cue can trigger a spatiotemporal pattern of neural activity similar to that evoked by a learned stimulus sequence.…

Neurons and Cognition · Quantitative Biology 2015-07-03 Alan Veliz-Cuba , Harel Shouval , Kresimir Josic , Zachary P. Kilpatrick

In this paper we present a deeper analysis than has previously been carried out of a selective attention problem, and the evolution of continuous-time recurrent neural networks to solve it. We show that the task has a rich structure, and…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Eldan Goldenberg , Jacob R. Garcowski , Randall D. Beer

A graph embedding is a representation of graph vertices in a low-dimensional space, which approximately preserves properties such as distances between nodes. Vertex sequence-based embedding procedures use features extracted from linear…

Machine Learning · Computer Science 2020-01-22 Benedek Rozemberczki , Rik Sarkar

A novel and efficient end-to-end learning model for automatic modulation classification is proposed for wireless spectrum monitoring applications, which automatically learns from the time domain in-phase and quadrature data without…

Signal Processing · Electrical Eng. & Systems 2021-01-21 Kaisheng Liao , Yaodong Zhao , Jie Gu , Yaping Zhang , Yi Zhong

We introduce a novel scheme to train binary convolutional neural networks (CNNs) -- CNNs with weights and activations constrained to {-1,+1} at run-time. It has been known that using binary weights and activations drastically reduce memory…

Machine Learning · Computer Science 2017-12-01 Xiaofan Lin , Cong Zhao , Wei Pan

This paper proposes ReBNet, an end-to-end framework for training reconfigurable binary neural networks on software and developing efficient accelerators for execution on FPGA. Binary neural networks offer an intriguing opportunity for…

Machine Learning · Computer Science 2018-03-29 Mohammad Ghasemzadeh , Mohammad Samragh , Farinaz Koushanfar

We describe and analyze a simple and effective algorithm for sequence segmentation applied to speech processing tasks. We propose a neural architecture that is composed of two modules trained jointly: a recurrent neural network (RNN) module…

Computation and Language · Computer Science 2016-10-26 Yossi Adi , Joseph Keshet , Emily Cibelli , Matthew Goldrick

Caching at the edge is a promising technique to cope with the increasing data demand in wireless networks. This paper analyzes the performance of cellular networks consisting of a tier macro-cell wireless backhaul nodes overlaid with a tier…

Information Theory · Computer Science 2017-05-25 Italo Atzeni , Marco Maso , Imène Ghamnia , Ejder Baştuğ , Mérouane Debbah

Generative models reliant on sequential autoregression have been at the forefront of language generation for an extensive period, particularly following the introduction of widely acclaimed transformers. Despite its excellent performance,…

Computation and Language · Computer Science 2024-06-21 Yaguang Li , Xin Chen

Recurrent neural network (RNN) and connectionist temporal classification (CTC) have showed successes in many sequence labeling tasks with the strong ability of dealing with the problems where the alignment between the inputs and the target…

Computer Vision and Pattern Recognition · Computer Science 2017-10-10 Hongjian Zhan , Qingqing Wang , Yue Lu

Reservoir Computing is a class of simple yet efficient Recurrent Neural Networks where internal weights are fixed at random and only a linear output layer is trained. In the large size limit, such random neural networks have a deep…

Machine Learning · Statistics 2021-02-18 Jonathan Dong , Ruben Ohana , Mushegh Rafayelyan , Florent Krzakala

Priority queues are fundamental data structures with widespread applications in various domains, including graph algorithms and network simulations. Their performance critically impacts the overall efficiency of these algorithms.…

Data Structures and Algorithms · Computer Science 2023-11-27 Kiarash Parvizi

We present trellis networks, a new architecture for sequence modeling. On the one hand, a trellis network is a temporal convolutional network with special structure, characterized by weight tying across depth and direct injection of the…

Machine Learning · Computer Science 2019-03-13 Shaojie Bai , J. Zico Kolter , Vladlen Koltun

Developing an MR sequence is challenging and remains largely constrained by human intuition. Recently, AI-driven approaches have been proposed; however, most require an initial sequence for parameter optimization or extensive training…

Artificial Intelligence · Computer Science 2026-04-17 Rokgi Hong , Hongjun An , Sooyeon Ji , Jongho Lee

Recent sequential pattern mining methods have used the minimum description length (MDL) principle to define an encoding scheme which describes an algorithm for mining the most compressing patterns in a database. We present a novel…

Machine Learning · Statistics 2016-11-14 Jaroslav Fowkes , Charles Sutton

This work proposes deep network models and learning algorithms for unsupervised and supervised binary hashing. Our novel network design constrains one hidden layer to directly output the binary codes. This addresses a challenging issue in…

Computer Vision and Pattern Recognition · Computer Science 2016-07-19 Thanh-Toan Do , Anh-Dzung Doan , Ngai-Man Cheung

As deep nets are increasingly used in applications suited for mobile devices, a fundamental dilemma becomes apparent: the trend in deep learning is to grow models to absorb ever-increasing data set sizes; however mobile devices are designed…

Machine Learning · Computer Science 2015-04-21 Wenlin Chen , James T. Wilson , Stephen Tyree , Kilian Q. Weinberger , Yixin Chen

Neuronal systems need to process temporal signals. We here show how higher-order temporal (co-)fluctuations can be employed to represent and process information. Concretely, we demonstrate that a simple biologically inspired feedforward…

Neurons and Cognition · Quantitative Biology 2023-09-13 Sandra Nestler , Moritz Helias , Matthieu Gilson