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We study the relation between the minimal spanning tree (MST) on many random points and the "near-minimal" tree which is optimal subject to the constraint that a proportion $\delta$ of its edges must be different from those of the MST.…

Probability · Mathematics 2007-07-24 David Aldous , Charles Bordenave , Marc Lelarge

Consider a random recusive tree with n vertices. We show that the number of vertices with even depth is asymptotically normal as n tends to infinty. The same is true for the number of vertices of depth divisible by m for m=3, 4 or 5; in all…

Probability · Mathematics 2007-05-23 Svante Janson

Neural networks are becoming an increasingly important tool in applications. However, neural networks are not widely used in statistical genetics. In this paper, we propose a new neural networks method called expectile neural networks. When…

Statistics Theory · Mathematics 2020-11-04 Jinghang Lin , Xiaoxi Shen , Qing Lu

Tree-based phylogenetic networks, which may be roughly defined as leaf-labeled networks built by adding arcs only between the original tree edges, have elegant properties for modeling evolutionary histories. We answer an open question of…

Asymptotic behaviour of maximum sizes of induced trees and forests has been studied extensively in last decades, though the overall picture is far from being complete. In this paper, we close several significant gaps: 1) We prove $2$-point…

Combinatorics · Mathematics 2024-08-28 Margarita Akhmejanova , Vladislav Kozhevnikov , Maksim Zhukovskii

We investigate the statistics of extremal path(s) (both the shortest and the longest) from the root to the bottom of a Cayley tree. The lengths of the edges are assumed to be independent identically distributed random variables drawn from a…

Statistical Mechanics · Physics 2009-10-31 Satya N. Majumdar , P. L. Krapivsky

We answer two questions raised by Bryant, Francis and Steel in their work on consensus methods in phylogenetics. Consensus methods apply to every practical instance where it is desired to aggregate a set of given phylogenetic trees (say,…

Populations and Evolution · Quantitative Biology 2023-11-14 Emanuele Delucchi , Linard Hoessly , Giovanni Paolini

In this paper, we redesign and simplify an algorithm due to Remy et al. for the generation of rooted planar trees that satisfies a given partition of degrees. This new version is now optimal in terms of random bit complexity, up to a…

Discrete Mathematics · Computer Science 2014-01-21 Olivier Bodini , David Julien , Marchal Philippe

We introduce two models for multi-type random trees motivated by studies of trait dependence in the evolution of species. Our discrete time model, the multi-type ERM tree, is a generalization of Markov propagation models on a random tree…

Probability · Mathematics 2020-12-29 Lea Popovic , Mariolys Rivas

The maximum-likelihood estimator of nonlinear panel data models with fixed effects is consistent but asymptotically-biased under rectangular-array asymptotics. The literature has thus far concentrated its effort on devising methods to…

Econometrics · Economics 2022-01-28 Ayden Higgins , Koen Jochmans

Tuffley and Steel (1997) proved that Maximum Likelihood and Maximum Parsimony methods in phylogenetics are equivalent for sequences of characters under a simple symmetric model of substitution with no common mechanism. This result has been…

Populations and Evolution · Quantitative Biology 2009-07-06 Mareike Fischer , Bhalchandra D. Thatte

Ranking problems based on pairwise comparisons, such as those arising in online gaming, often involve a large pool of items to order. In these situations, the gap in performance between any two items can be significant, and the smallest and…

Statistics Theory · Mathematics 2022-06-16 Heejong Bong , Alessandro Rinaldo

We study asymptotic properties of maximum likelihood estimators for Heston models based on continuous time observations of the log-price process. We distinguish three cases: subcritical (also called ergodic), critical and supercritical. In…

Statistics Theory · Mathematics 2016-07-25 Matyas Barczy , Gyula Pap

We consider critical multitype Bienaym\'e trees that are either irreducible or possess a critical irreducible component with attached subcritical components. These trees are studied under two distinct conditioning frameworks: first,…

Probability · Mathematics 2025-08-01 Louigi Addario-Berry , Philipp Beltran , Benedikt Stufler , Paul Thévenin

We consider the problem of learning the structure of undirected graphical models with bounded treewidth, within the maximum likelihood framework. This is an NP-hard problem and most approaches consider local search techniques. In this…

Machine Learning · Computer Science 2012-12-12 K. S. Sesh Kumar , Francis Bach

The Bradley-Terry model is widely used for pairwise comparison data analysis. In this paper, we analyze the asymptotic behavior of the maximum likelihood estimator of the Bradley-Terry model in its logistic parameterization, under a general…

Statistics Theory · Mathematics 2022-05-10 Weichen Wu , Brian W. Junker , Nynke M. D. Niezink

The goal of these lectures is to review some mathematical aspects of random tree models used in evolutionary biology to model gene trees or species trees. We start with stochastic models of tree shapes (finite trees without edge lengths),…

Probability · Mathematics 2017-08-30 Amaury Lambert

Phylogenetic networks are necessary to represent the tree of life expanded by edges to represent events such as horizontal gene transfers, hybridizations or gene flow. Not all species follow the paradigm of vertical inheritance of their…

Populations and Evolution · Quantitative Biology 2016-02-15 Claudia Solís-Lemus , Cécile Ané

We study the asymptotic theory of misspecified models for diffusion processes with noisy nonsynchronous observations. Unlike with correctly specified models, the original maximum-likelihood-type estimator has an asymptotic bias under the…

Statistics Theory · Mathematics 2019-12-30 Teppei Ogihara

F\'elix-Medina and Thompson (2004) proposed a variant of link-tracing sampling to estimate the size of a hidden population such as drug users, sexual workers or homeless people. In their variant a sampling frame of sites where the members…

Methodology · Statistics 2015-06-23 Martin H. Félix Medina