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In this work we study the limit distribution of an appropriately normalized cophenetic index of the pure-birth tree conditioned on $n$ contemporary tips. We show that this normalized phylogenetic balance index is a submartingale that…

Populations and Evolution · Quantitative Biology 2020-11-23 Krzysztof Bartoszek

We study the asymptotic behavior of the maximum degree in the evolving tree model with a choice based on both degree and fitness of a vertex. The tree is constructed in the following recursive way. Each vertex is assigned a parameter to it…

Probability · Mathematics 2020-12-15 Yury Malyshkin

For two decades, the Colless index has been the most frequently used statistic for assessing the balance of phylogenetic trees. In this article, this statistic is studied under the Yule and uniform model of phylogenetic trees. The main tool…

Probability · Mathematics 2007-05-23 Michael G. B. Blum , Olivier François , Svante Janson

By introducing the notions of living and dead nodes a new model of random tree evolution with continuous time parameter has been constructed. It is assumed that two random variables, the lifetime and the offspring number of living nodes…

Statistical Mechanics · Physics 2007-05-23 L. Pal

Extreme multi-label classification (XMLC) is a learning task of tagging instances with a small subset of relevant labels chosen from an extremely large pool of possible labels. Problems of this scale can be efficiently handled by organizing…

Machine Learning · Computer Science 2020-09-24 Kalina Jasinska-Kobus , Marek Wydmuch , Krzysztof Dembczynski , Mikhail Kuznetsov , Robert Busa-Fekete

We study the statistics of height and balanced height in the binary search tree problem in computer science. The search tree problem is first mapped to a fragmentation problem which is then further mapped to a modified directed polymer…

Statistical Mechanics · Physics 2009-11-07 Satya N. Majumdar , P. L. Krapivsky

We are interested in the asymptotic analysis of the binary search tree (BST) under the random permutation model. Via an embedding in a continuous time model, we get new results, in particular the asymptotic behavior of the profile.

Probability · Mathematics 2007-05-23 Brigitte Chauvin , Thierry Klein , Jean-Francois Marckert , Alain Rouault

In a phylogenetic tree, we often don't have information about the time a speciation event (inner node) occured. Under a neutral model for speciation, I develop fast algorithms for calculating the probability that an inner node i is the k-th…

Combinatorics · Mathematics 2015-10-20 Tanja Gernhard

We study maximum likelihood estimation for the statistical model for undirected random graphs, known as the $\beta$-model, in which the degree sequences are minimal sufficient statistics. We derive necessary and sufficient conditions, based…

Other Statistics · Statistics 2013-06-19 Alessandro Rinaldo , Sonja Petrović , Stephen E. Fienberg

We investigate the number of permutations that occur in random labellings of trees. This is a generalisation of the number of subpermutations occurring in a random permutation. It also generalises some recent results on the number of…

Probability · Mathematics 2022-12-22 Michael Albert , Cecilia Holmgren , Tony Johansson , Fiona Skerman

The classes of tree permutations and forest permutations were defined by Acan and Hitczenko (2016). We study random permutations of a given length from these classes, and in particular the number of occurrences of a fixed pattern in one of…

Combinatorics · Mathematics 2022-03-10 Svante Janson

Null models of binary phylogenetic trees are useful for testing hypotheses on real world phylogenies. In this paper we consider phylogenies as binary trees without edge lengths together with a sampling measure and encode them as algebraic…

Probability · Mathematics 2020-06-17 Josué Nussbaumer , Anita Winter

One approach to estimating a species tree from a collection of gene trees is to first estimate probabilities of clades from the gene trees, and then to construct the species tree from the estimated clade probabilities. While a greedy…

Populations and Evolution · Quantitative Biology 2012-11-14 Elizabeth S. Allman , James H. Degnan , John A. Rhodes

We study a random tree, which was introduced by Ajazi et al. as part of a model of a neuronal network. Realising a scaling relation for the law of the tree, we can use elementary techniques to derive asymptotic results on the geometry as…

Probability · Mathematics 2024-06-25 Lukas Schoug

In image detection, one problem is to test whether the set, though mostly consisting of uniformly scattered points, also contains a small fraction of points sampled from some (a priori unknown) curve, for example, a curve with…

Applications · Statistics 2020-01-03 Kai Ni , Shanshan Cao , Xiaoming Huo

We investigate extremal statistical properties such as the maximal and the minimal heights of randomly generated binary trees. By analyzing the master evolution equations we show that the cumulative distribution of extremal heights…

Statistical Mechanics · Physics 2007-05-23 E. Ben-Naim , P. L. Krapivsky , Satya N. Majumdar

To understand how hidden information can be extracted from statistical networks, planted models in random graphs have been the focus of intensive study in recent years. In this work, we consider the detection of a planted matching, i.e., an…

Statistics Theory · Mathematics 2025-12-17 Timothy L. H. Wee , Cheng Mao

Maximum likelihood estimation (MLE) methods are widely used for evolutionary tree. As evolutionary tree is not a smooth parameter, the consistency of its MLE has been a topic of debate. It has been noted without proof that the classical…

Populations and Evolution · Quantitative Biology 2014-05-06 Arindam RoyChoudhury

We develop a general statistical framework for the analysis and inference of large tree-structured data, with a focus on developing asymptotic goodness-of-fit tests. We first propose a consistent statistical model for binary trees, from…

We consider the model of random trees introduced by Devroye (1999), the so-called random split trees. The model encompasses many important randomized algorithms and data structures. We then perform supercritical Bernoulli bond-percolation…

Probability · Mathematics 2021-06-01 Gabriel Berzunza , Cecilia Holmgren