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We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Statistical Mechanics · Physics 2015-07-08 Ricardo Martínez-García , Clara Murgui , Emilio Hernández-García , Cristóbal López

Based on laboratory based growth of plant-like structures from inorganic materials, we present new theory for the emergence of plant structure at a range of scales dictated by levels of ionization (charge density), which can be traced…

General Physics · Physics 2017-01-24 Philip Turner , Laurent Nottale

In harsh environments, organisms may self-organize into spatially patterned systems in various ways. So far, studies of ecosystem spatial self-organization have primarily focused on apparent orders reflected by regular patterns. However,…

Populations and Evolution · Quantitative Biology 2023-11-15 Wensi Hu , Quan-Xing Liu , Bo Wang , Nuo Xu , Lijuan Cui , Chi Xu

The adoption of agroecological practices will be crucial to address the challenges of climate change and biodiversity loss. Such practices favor the cultivation of plants in complex mixtures with layouts differing from the monoculture…

Populations and Evolution · Quantitative Biology 2024-09-26 Julian Talbot , Pascal Viot , David Colliaux

Vegetation in semi-arid ecosystems frequently organizes into spatially heterogeneous mosaics that regulate ecosystem functioning, productivity, and resilience. These patterns arise from local biological interactions, including facilitation…

Populations and Evolution · Quantitative Biology 2026-02-06 Àlex Giménez-Romero , Bernard A. Afful , Priscilla E. Greenwood , Manuel A. Matías , Luis F. Gordillo

In this work, we present and analyze a general framework for vegetation dynamics in arid and semi-arid ecosystems in which non-local interactions are purely competitive. The generality of the formulation enables a systematic search for…

Pattern Formation and Solitons · Physics 2026-04-21 Jelle van der Voort , Ricardo Martinez-Garcia , Arjen Doelman

Ecological spatial patterns reflect the underlying processes that shape the structure of species and communities. Mechanisms like inter and intra species competition, dispersal and host-pathogen interactions are believed to act over a wide…

Populations and Evolution · Quantitative Biology 2020-07-01 Efrat Seri , Elad Shtilerman , Nadav M. Shnerb

Adiabatic invariants foliate phase space, and impart a macro-scale hierarchy by separating microscopic variables. On a macroscopic leaf, long-scale ordered structures are created while maximizing entropy. A plasma confined in a…

Plasma Physics · Physics 2014-10-14 Z. Yoshida , S. M. Mahajan

We investigate the formation of localized structures with a varying width in one and two-dimensional systems. The mechanism of stabilization is attributed to strong nonlocal coupling mediated by a Lorentzian type of Kernel. We show that, in…

Pattern Formation and Solitons · Physics 2015-06-23 D. Escaff , C. Fernandez-Oto , M. G. Clerc , M. Tlidi

The minimal ecological requirements for formation of regular vegetation patterns in semiarid systems have been recently questioned. Against the general belief that a combination of facilitative and competitive interactions is necessary,…

Populations and Evolution · Quantitative Biology 2014-09-24 Ricardo Martinez-Garcia , Justin M. Calabrese , E. Hernandez-Garcia , C. Lopez

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong

Over the last few decades, ecologists have come to appreciate that key ecological patterns, which describe ecological communities at relatively large spatial scales, are not only scale dependent, but also intimately intertwined. The…

Populations and Evolution · Quantitative Biology 2016-09-13 Fabio Peruzzo , Sandro Azaele

Close to the critical point associated with nascent of bistability and large wavelength pattern forming regime, {\it the Lifshitz point}, the dynamics of many ecological spatially extended systems can be reduced to a simple partial…

Pattern Formation and Solitons · Physics 2019-12-24 M. Tlidi , E. Berrios-Caro , D. Pinto-Ramo , A. G. Vladimirov , M. Clerc

We study the ordered equilibrium structures of patchy particles where the patches are located on the surface of the colloid such that they form a regular tetrahedron. Using optimization techniques based on ideas of evolutionary algorithms…

Soft Condensed Matter · Physics 2015-06-05 G. Doppelbauer , E. G. Noya , E. Bianchi , G. Kahl

Metapopulation models have been instrumental in demonstrating the ecological impact of landscape structure on the survival of a focal species in complex environments. However, extensions to multiple species with arbitrary dispersal networks…

Populations and Evolution · Quantitative Biology 2024-11-06 Prajwal Padmanabha , Giorgio Nicoletti , Davide Bernardi , Samir Suweis , Sandro Azaele , Andrea Rinaldo , Amos Maritan

Arbuscular mycorrhiza (AM) is the most wide-spread plant-fungus symbiosis on earth. Investigating this kind of symbiosis is considered one of the most promising ways to develop methods to nurture plants in more natural manners, avoiding the…

Logic in Computer Science · Computer Science 2011-09-08 Cristina Calcagno , Mario Coppo , Ferruccio Damiani , Maurizio Drocco , Eva Sciacca , Salvatore Spinella , Angelo Troina

Self-organizing processes shape Earth's surface, creating complex patterns from simple rules in most landforms. Rainfall-induced mass movements dramatically reshape landscapes through rapid sediment transfer, but whether they self-organize…

Geophysics · Physics 2026-01-06 Zhengjing Ma , Gang Mei , Nengxiong Xu , Yongshuang Zhang , Jianbing Peng

We model evolution of plants in a world, made up of different locations, with multiple environments (mutually exclusive and collectively exhaustive subsets of locations). Each environment (landmass) has temperature, rainfall, and other…

Populations and Evolution · Quantitative Biology 2019-05-27 Alexander , Khazatsky , Albert Yu , Zihao Zhao , Gabe Zuckerman

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

Palms are ecologically and economically indicators of tropical forest health, biodiversity, and human impact that support local economies and global forest product supply chains. While palm detection in plantations is well-studied, efforts…

Computer Vision and Pattern Recognition · Computer Science 2025-11-05 Kangning Cui , Rongkun Zhu , Manqi Wang , Wei Tang , Gregory D. Larsen , Victor P. Pauca , Sarra Alqahtani , Fan Yang , David Segurado , David Lutz , Jean-Michel Morel , Miles R. Silman