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Temporal environmental variations are ubiquitous in nature, yet most of the theoretical works in population genetics and evolution assume fixed environment. Here we analyze the effect of variations in carrying capacity on the fate of a…

Populations and Evolution · Quantitative Biology 2019-12-16 Immanuel Meyer , Nadav M. Shnerb

A simple analytical framework to study the molecular quasispecies evolution of finite populations is proposed, in which the population is assumed to be a random combination of the constiyuent molecules in each generation,i.e., linkage…

Statistical Mechanics · Physics 2016-08-31 Domingos Alves , J. F. Fontanari

An alternative approach - nonequilibrium evolution thermodynamics, is compared with classical Landau approach. A statistical justification of the approach is carried out with help of probability distribution function on an example of a…

Statistical Mechanics · Physics 2010-08-13 Leonid S. Metlov

In this paper, we are interested in the analysis of a well-known free boundary/shape optimization problem motivated by some issues arising in population dynamics. The question is to determine optimal spatial arrangements of favorable and…

Analysis of PDEs · Mathematics 2016-11-15 Jimmy Lamboley , Antoine Laurain , Grégoire Nadin , Yannick Privat

Finding equilibria of the finite size Kuramoto model amounts to solving a nonlinear system of equations, which is an important yet challenging problem. We translate this into an algebraic geometry problem and use numerical methods to find…

Chaotic Dynamics · Physics 2015-05-20 Dhagash Mehta , Noah Daleo , Florian Dörfler , Jonathan D. Hauenstein

A population genetics model based on a multitype branching process, or equivalently a Galton-Watson branching process for multiple alleles, is pre- sented. The diffusion limit forward Kolmogorov equation is derived for the case of neutral…

Populations and Evolution · Quantitative Biology 2018-02-21 Conrad J. Burden , Yi Wei

We consider a general class of Markovian models describing the growth in a randomly fluctuating environment of a clonal biological population having several phenotypes related by stochastic switching. Phenotypes differ e.g. by the level of…

Populations and Evolution · Quantitative Biology 2022-01-25 J. Unterberger

Coevolving and competing species or game-theoretic strategies exhibit rich and complex dynamics for which a general theoretical framework based on finite populations is still lacking. Recently, an explicit mean-field description in the form…

Statistical Mechanics · Physics 2007-05-23 Arne Traulsen , Jens Christian Claussen , Christoph Hauert

Fluctuations of cell state, e.g., abundances of some proteins, have attracted much attention both theoretically and experimentally. The distribution of such state over cells, however, is not only a result of intracellular stochastic…

Biological Physics · Physics 2007-05-23 Katsuhiko Sato , Kunihiko Kaneko

This Letter studies the quasispecies dynamics of a population capable of genetic repair evolving on a time-dependent fitness landscape. We develop a model that considers an asexual population of single-stranded, conservatively replicating…

Populations and Evolution · Quantitative Biology 2009-11-13 Pavel Gorodetsky , Emmanuel Tannenbaum

This paper is concerned with the initial-boundary value problem for an evolutionary variational inequality complying with three intrinsic properties: complete irreversibility, unilateral equilibrium of an energy and an energy conservation…

Analysis of PDEs · Mathematics 2023-05-11 Goro Akagi , Kotaro Sato

We consider a model for Darwinian evolution in an asexual population with a large but non-constant populations size characterized by a natural birth rate, a logistic death rate modelling competition and a probability of mutation at each…

Probability · Mathematics 2015-08-28 Martina Baar , Anton Bovier , Nicolas Champagnat

We consider nonlinear mutation selection models, known as replicator-mutator equations in evolutionary biology. They involve a nonlocal mutation kernel and a confining fitness potential. We prove that the long time behaviour of the Cauchy…

Analysis of PDEs · Mathematics 2023-09-25 Matthieu Alfaro , Pierre Gabriel , Otared Kavian

This paper deals with the positivity condition of an infinite-dimensional evolutionary equation, associated with a control problem for the optimal consumption over space. We consider a spatial growth model for capital, with production…

Theoretical Economics · Economics 2023-11-14 Cristiano Ricci

This paper concerns spectral stability of nonlinear waves in KdV-type evolution equations. The relevant eigenvalue problem is defined by the composition of an unbounded self-adjoint operator with a finite number of negative eigenvalues and…

Analysis of PDEs · Mathematics 2013-04-08 Dmitry E. Pelinovsky

Protecting endangered species has been an important issue in ecology. We derive a reaction-diffusion model for a population in a one-dimensional bounded habitat, where the population is subjected to a strong Allee effect in its natural…

Dynamical Systems · Mathematics 2023-08-16 Yu Jin , Rui Peng , Jinfeng Wang

We study the evolution of gene frequencies in a population living in $\mathbb{R}^d$, modelled by the spatial Lambda Fleming-Viot process with natural selection (Barton, Etheridge and Veber, 2010 and Etheridge, Veber and Yu, 2014). We…

Probability · Mathematics 2022-10-04 Raphaël Forien , Sarah Penington

We consider a population evolving due to mutation, selection and recombination, where selection includes single-locus terms (additive fitness) and two-loci terms (pairwise epistatic fitness). We further consider the problem of inferring…

Populations and Evolution · Quantitative Biology 2021-09-01 Hong-Li Zeng , Eugenio Mauri , Vito Dichio , Simona Cocco , Remi Monasson , Erik Aurell

In this paper, we discover that the class of random polynomials arising from the equilibrium analysis of random asymmetric evolutionary games is \textit{exactly} the Kostlan-Shub-Smale system of random polynomials, revealing an intriguing…

Probability · Mathematics 2024-10-03 Manh Hong Duong , The Anh Han

We study the evolution of mutation rates for an asexual population living on a static fitness landscape, consisting of multiple peaks forming an evolutionary staircase. The optimal mutation rate is found by maximizing the diffusion towards…

Biological Physics · Physics 2007-05-23 M. Nilsson