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In a world abundant with diverse data arising from complex acquisition techniques, there is a growing need for new data analysis methods. In this paper we focus on high-dimensional data that are organized into several hierarchical datasets.…

Machine Learning · Computer Science 2021-04-06 Lior Aloni , Omer Bobrowski , Ronen Talmon

Hierarchical clustering is a popular unsupervised data analysis method. For many real-world applications, we would like to exploit prior information about the data that imposes constraints on the clustering hierarchy, and is not captured by…

Data Structures and Algorithms · Computer Science 2018-07-17 Vaggos Chatziafratis , Rad Niazadeh , Moses Charikar

Commercial off-the-shelf DataBase Management Systems (DBMSes) are highly optimized to process a wide range of queries by means of carefully designed indexing and query planning. However, many aggregate range queries are usually performed by…

Databases · Computer Science 2019-12-18 Diego Pennino , Maurizio Pizzonia , Alessio Papi

Information, stored or transmitted in digital form, is often structured. Individual data records are usually represented as hierarchies of their elements. Together, records form larger structures. Information processing applications have to…

Computation and Language · Computer Science 2007-05-23 Nikita Schmidt , Ahmed Patel

Topological data analysis is an emerging field that applies the study of topological invariants to data. Perhaps the simplest of these invariants is the number of connected components or clusters. In this work, we explore a topological…

Computational Geometry · Computer Science 2023-12-19 Ian Stewart Joyce , Grant Erdmann , Kirk P. Gardner , Ryan Kramer , Kyle Siegrist

This paper focuses on the problem of hierarchical non-overlapping clustering of a dataset. In such a clustering, each data item is associated with exactly one leaf node and each internal node is associated with all the data items stored in…

Machine Learning · Statistics 2021-05-26 Weipeng Huang , Nishma Laitonjam , Guangyuan Piao , Neil Hurley

Modern business and economic datasets often exhibit nonlinear, multi-scale structures that traditional linear tools under-represent. Topological Data Analysis (TDA) offers a geometric lens for uncovering robust patterns, such as connected…

Machine Learning · Statistics 2025-11-18 Ioannis Diamantis

Document structure analysis (aka document layout analysis) is crucial for understanding the physical layout and logical structure of documents, with applications in information retrieval, document summarization, knowledge extraction, etc.…

Computer Vision and Pattern Recognition · Computer Science 2024-03-29 Jiawei Wang , Kai Hu , Zhuoyao Zhong , Lei Sun , Qiang Huo

Comparing networks is essential for a number of downstream tasks, from clustering to anomaly detection. Despite higher-order interactions being critical for understanding the dynamics of complex systems, traditional approaches for network…

Physics and Society · Physics 2025-11-03 Helcio Felippe , Alec Kirkley , Federico Battiston

Generalized Pythagoras trees were developed for visualizing hierarchical data, producing organic, fractal-like representations. However, the drawback of the original layout algorithm is visual overlap of tree branches. To avoid such…

Graphics · Computer Science 2019-07-31 Tanja Munz , Michael Burch , Toon van Benthem , Yoeri Poels , Fabian Beck , Daniel Weiskopf

Given a set of finite words, the Overlap Graph (OG) is a complete weighted digraph where each word is a node and where the weight of an arc equals the length of the longest overlap of one word onto the other (Overlap is an asymmetric…

Data Structures and Algorithms · Computer Science 2021-11-18 Bastien Cazaux , Eric Rivals

A novel method to obtain hierarchical and overlapping clusters from network data -i.e., a set of nodes endowed with pairwise dissimilarities- is presented. The introduced method is hierarchical in the sense that it outputs a nested…

Social and Information Networks · Computer Science 2017-12-13 Fernando Gama , Santiago Segarra , Alejandro Ribeiro

The last decades have not only been characterized by an explosive growth of data, but also an increasing appreciation of data as a valuable resource. Their value comes with the ability to extract meaningful patterns that are of economic,…

Machine Learning · Statistics 2020-02-27 Jonas I. Liechti , Sebastian Bonhoeffer

The paper addresses design/building frameworks for some kinds of tree-like and hierarchical structures of systems. The following approaches are examined: (1) expert-based procedures, (2) hierarchical clustering; (3) spanning problems (e.g.,…

Optimization and Control · Mathematics 2012-12-12 Mark Sh. Levin

Networks have in recent years emerged as an invaluable tool for describing and quantifying complex systems in many branches of science. Recent studies suggest that networks often exhibit hierarchical organization, where vertices divide into…

Machine Learning · Statistics 2008-11-05 Aaron Clauset , Cristopher Moore , M. E. J. Newman

Many complex systems in nature and society can be described in terms of networks capturing the intricate web of connections among the units they are made of. A key question is how to interpret the global organization of such networks as the…

Physics and Society · Physics 2007-05-23 Gergely Palla , Imre Derenyi , Illes Farkas , Tamas Vicsek

Membership diversity is a characteristic aspect of social networks in which a person may belong to more than one social group. For this reason, discovering overlapping structures is necessary for realistic social analysis. In this paper, we…

Social and Information Networks · Computer Science 2013-05-15 Jierui Xie , Boleslaw K. Szymanski

Tensor network methods provide a scalable solution to represent high-dimensional data. However, their efficacy is often limited by static, expert-defined structures that fail to adapt to evolving data correlations. We address this…

Computational Engineering, Finance, and Science · Computer Science 2026-03-31 Zheng Guo , Aditya Deshpande , Xinyu Wang , Brian C. Kiedrowski , Alex A. Gorodetsky

We implemented three recently proposed approaches to the identification of overlapping and hierarchical substructures in graphs and applied the corresponding algorithms to a network of 492 information-science papers coupled via their cited…

Physics and Society · Physics 2012-04-05 Frank Havemann , Jochen Gläser , Michael Heinz , Alexander Struck

Pattern matching can be used to calculate the support of patterns, and is a key issue in sequential pattern mining (or sequence pattern mining). Nonoverlapping pattern matching means that two occurrences cannot use the same character in the…

Databases · Computer Science 2022-09-08 Youxi Wu , Bojing Jian , Yan Li , He Jiang , Xindong Wu
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