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Robust automated organ segmentation is a prerequisite for computer-aided diagnosis (CAD), quantitative imaging analysis and surgical assistance. For high-variability organs such as the pancreas, previous approaches report undesirably low…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Amal Farag , Le Lu , Holger R. Roth , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

Automatic organ segmentation is an important prerequisite for many computer-aided diagnosis systems. The high anatomical variability of organs in the abdomen, such as the pancreas, prevents many segmentation methods from achieving high…

Computer Vision and Pattern Recognition · Computer Science 2015-09-17 Holger R. Roth , Amal Farag , Le Lu , Evrim B. Turkbey , Ronald M. Summers

Automatic organ segmentation is an important yet challenging problem for medical image analysis. The pancreas is an abdominal organ with very high anatomical variability. This inhibits previous segmentation methods from achieving high…

Computer Vision and Pattern Recognition · Computer Science 2015-06-23 Holger R. Roth , Le Lu , Amal Farag , Hoo-Chang Shin , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

Deep neural networks have been widely adopted for automatic organ segmentation from abdominal CT scans. However, the segmentation accuracy of some small organs (e.g., the pancreas) is sometimes below satisfaction, arguably because deep…

Computer Vision and Pattern Recognition · Computer Science 2017-06-22 Yuyin Zhou , Lingxi Xie , Wei Shen , Yan Wang , Elliot K. Fishman , Alan L. Yuille

Due to the fact that pancreas is an abdominal organ with very large variations in shape and size, automatic and accurate pancreas segmentation can be challenging for medical image analysis. In this work, we proposed a fully automated two…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Ningning Zhao , Nuo Tong , Dan Ruan , Ke Sheng

Automatic segmentation of an organ and its cystic region is a prerequisite of computer-aided diagnosis. In this paper, we focus on pancreatic cyst segmentation in abdominal CT scan. This task is important and very useful in clinical…

Computer Vision and Pattern Recognition · Computer Science 2017-06-23 Yuyin Zhou , Lingxi Xie , Elliot K. Fishman , Alan L. Yuille

Accurate automatic organ segmentation is an important yet challenging problem for medical image analysis. The pancreas is an abdominal organ with very high anatomical variability. This inhibits traditional segmentation methods from…

Computer Vision and Pattern Recognition · Computer Science 2016-06-28 Holger R. Roth , Le Lu , Amal Farag , Andrew Sohn , Ronald M. Summers

Accurate and automatic organ segmentation from 3D radiological scans is an important yet challenging problem for medical image analysis. Specifically, the pancreas demonstrates very high inter-patient anatomical variability in both its…

Computer Vision and Pattern Recognition · Computer Science 2017-02-02 Holger R. Roth , Le Lu , Nathan Lay , Adam P. Harrison , Amal Farag , Andrew Sohn , Ronald M. Summers

This paper presents a fully automated atlas-based pancreas segmentation method from CT volumes utilizing 3D fully convolutional network (FCN) feature-based pancreas localization. Segmentation of the pancreas is difficult because it has…

Computer Vision and Pattern Recognition · Computer Science 2018-06-11 Masahiro Oda , Natsuki Shimizu , Holger R. Roth , Ken'ichi Karasawa , Takayuki Kitasaka , Kazunari Misawa , Michitaka Fujiwara , Daniel Rueckert , Kensaku Mori

Accurate segmentation for medical images is important for clinical diagnosis. Existing automatic segmentation methods are mainly based on fully supervised learning and have an extremely high demand for precise annotations, which are very…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Yuanpeng Liu , Qinglei Hui , Zhiyi Peng , Shaolin Gong , Dexing Kong

Efficient organ segmentation is the precondition of various quantitative analysis. Segmenting the pancreas from abdominal CT images is a challenging task because of its high anatomical variability in shape, size and location. What's more,…

Computer Vision and Pattern Recognition · Computer Science 2020-03-10 Jinchan He , Xiaxia Yu , Chudong Cai , Yi Gao

An accurate segmentation of the pancreas on CT is crucial to identify pancreatic pathologies and extract imaging-based biomarkers. However, prior research on pancreas segmentation has primarily focused on modifying the segmentation model…

Image and Video Processing · Electrical Eng. & Systems 2025-04-10 Anisa V. Prasad , Tejas Sudharshan Mathai , Pritam Mukherjee , Jianfei Liu , Ronald M. Summers

Organ and cancer segmentation in abdomen Computed Tomography (CT) scans is the prerequisite for precise cancer diagnosis and treatment. Most existing benchmarks and algorithms are tailored to specific cancer types, limiting their ability to…

Image and Video Processing · Electrical Eng. & Systems 2024-08-23 Jun Ma , Yao Zhang , Song Gu , Cheng Ge , Ershuai Wang , Qin Zhou , Ziyan Huang , Pengju Lyu , Jian He , Bo Wang

Automated volumetric segmentation of the pancreas on cross-sectional imaging is needed for diagnosis and follow-up of pancreatic diseases. While CT-based pancreatic segmentation is more established, MRI-based segmentation methods are…

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

This paper proposes a fully automated atlas-based pancreas segmentation method from CT volumes utilizing atlas localization by regression forest and atlas generation using blood vessel information. Previous probabilistic atlas-based…

Computer Vision and Pattern Recognition · Computer Science 2020-05-08 Masahiro Oda , Natsuki Shimizu , Ken'ichi Karasawa , Yukitaka Nimura , Takayuki Kitasaka , Kazunari Misawa , Michitaka Fujiwara , Daniel Rueckert , Kensaku Mori

Automatic pancreas segmentation in radiology images, eg., computed tomography (CT) and magnetic resonance imaging (MRI), is frequently required by computer-aided screening, diagnosis, and quantitative assessment. Yet pancreas is a…

Computer Vision and Pattern Recognition · Computer Science 2018-04-02 Jinzheng Cai , Le Lu , Fuyong Xing , Lin Yang

Pancreas segmentation in computed tomography imaging has been historically difficult for automated methods because of the large shape and size variations between patients. In this work, we describe a custom-build 3D fully convolutional…

Computer Vision and Pattern Recognition · Computer Science 2018-03-15 Holger Roth , Masahiro Oda , Natsuki Shimizu , Hirohisa Oda , Yuichiro Hayashi , Takayuki Kitasaka , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

Background: Automated analysis of CT scans for abdominal organ measurement is crucial for improving diagnostic efficiency and reducing inter-observer variability. Manual segmentation and measurement of organs such as the kidneys, liver,…

Purposes: This study aimed to develop a computed tomography (CT)-based multi-organ segmentation model for delineating organs-at-risk (OARs) in pediatric upper abdominal tumors and evaluate its robustness across multiple datasets. Materials…

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