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The precise mechanism that causes HIV infection to progress to AIDS is still unknown. This paper presents a mathematical model which is able to predict the entire trajectory of the HIV/AIDS dynamics, then a possible explanation for this…

Cell Behavior · Quantitative Biology 2015-03-19 Esteban A. Hernandez-Vargas , Dhagash Mehta , Richard H. Middleton

Cervical cancer will cause 460 000 deaths per year by 2040, approximately 90% are Sub-Saharan African women. A constantly increasing incidence in Africa making cervical cancer a priority by the World Health Organization (WHO) in terms of…

Computer Vision and Pattern Recognition · Computer Science 2020-05-29 Ferdaous Idlahcen , Mohammed Majid Himmi , Abdelhak Mahmoudi

We present statistical techniques for analyzing global positioning system (GPS) data in order to understand, communicate about, and prevent patterns of violence. In this pilot study, participants in Nairobi, Kenya were asked to rate their…

Applications · Statistics 2020-02-18 Rina Friedberg , Clea Sarnquist , Gavin Nyairo , Mary Amuyunzu-Nyamongo , Michael Baiocchi

Female sex workers(FSWs) are one of the most vulnerable and stigmatized groups in society. As a result, they often suffer from a lack of quality access to care. Grassroot organizations engaged in improving health services are often faced…

Machine Learning · Computer Science 2020-12-04 Raghav Awasthi , Prachi Patel , Vineet Joshi , Shama Karkal , Tavpritesh Sethi

In people infected with HIV the RNA viral load is a good predictor of the rate of loss of CD4 cells at a population level but there is still great variability in the rate of decline of CD4 cells among individuals. Here we show that the…

Cell Behavior · Quantitative Biology 2009-08-12 Brian G. Williams , Eline L. Korenromp , Eleanor Gouws , Christopher Dye

We evaluate the efficiency of various heuristic strategies for allocating vaccines against COVID-19 and compare them to strategies found using optimal control theory. Our approach is based on a mathematical model which tracks the spread of…

Populations and Evolution · Quantitative Biology 2022-05-04 Jeta Molla , Alejandro Ponce de León Chávez , Takayuki Hiraoka , Tapio Ala-Nissila , Mikko Kivelä , Lasse Leskelä

Background. Several studies have used phylogenetics to investigate Human Immunodeficiency Virus (HIV) transmission among Men who have Sex with Men (MSMs) in Montreal, Quebec, Canada, revealing many transmission clusters. The Quebec HIV…

OBJECTIVE: To propose a new approach to analyze the age-distribution of reported cases for vector-transmitted infections. METHODS: Using officially reported number of cases of dengue, Zika, chikungunya, malaria and leishmaniasis for…

Populations and Evolution · Quantitative Biology 2026-03-18 Francisco Antonio Bezerra Coutinho , Marcos Amaku , Esper Georges Kallas , Eduardo Massad

Evaluation of HIV large scale interventions programme is becoming increasingly important, but impact estimates frequently hinge on knowledge of changes in behaviour such as the frequency of condom use (CU) over time, or other self-reported…

Like many chronic diseases, human immunodeficiency virus (HIV) is managed over time at regular clinic visits. At each visit, patient features are assessed, treatments are prescribed, and a subsequent visit is scheduled. There is a need for…

Methodology · Statistics 2024-10-31 Arman Oganisian , Joseph Hogan , Edwin Sang , Allison DeLong , Ben Mosong , Hamish Fraser , Ann Mwangi

We present a new joint longitudinal and survival model aimed at estimating the association between the risk of an event and the change in and history of a biomarker that is repeatedly measured over time. We use cubic B-splines models for…

Applications · Statistics 2009-10-12 Elizabeth R. Brown

We propose and investigate a delayed model that studies the relationship between HIV and the immune system during the natural course of infection and in the context of antiviral treatment regimes. Sufficient criteria for local asymptotic…

Optimization and Control · Mathematics 2018-03-19 Diana Rocha , Cristiana J. Silva , Delfim F. M. Torres

Chikungunya is an emerging threat for health security all over the world which is spreading very fast. Researches for proper forecasting of the incidence rate of chikungunya has been going on in many places in which DARPA has done a very…

Machine Learning · Computer Science 2021-01-12 Sayed Erfan Arefin , Tasnia Ashrafi Heya , Dr Moinul Zaber

To combat the HIV/AIDS pandemic effectively, targeted interventions among certain key populations play a critical role. Examples of such key populations include sex workers, people who inject drugs, and men who have sex with men. While…

Applications · Statistics 2021-07-14 Jacob Parsons , Xiaoyue Niu , Le Bao

We consider a general mathematical model of a within-host viral infection with $n$ virus strains and explicit age-since-infection structure for infected cells. In the model, multiple virus strains compete for a population of target cells.…

Populations and Evolution · Quantitative Biology 2014-05-28 Cameron J. Browne

Although combination antiretroviral therapy (ART) is highly effective in suppressing viral load for people with HIV (PWH), many ART agents may exacerbate central nervous system (CNS)-related adverse effects including depression. Therefore,…

Methodology · Statistics 2020-04-14 Wei Jin , Yang Ni , Leah H. Rubin , Amanda B. Spence , Yanxun Xu

We propose a model for the human immunodeficiency virus type 1 (HIV-1) infection with intracellular delay and prove the local asymptotical stability of the equilibrium points. Then we introduce a control function representing the efficiency…

Optimization and Control · Mathematics 2017-11-01 Filipe Rodrigues , Cristiana J. Silva , Delfim F. M. Torres , Helmut Maurer

Restrictions on social and economic activities, as well as vaccinations, have been a key intervention in containing the COVID-19 epidemic. Our work focuses on better understanding the options available to policymakers under the conditions…

Optimization and Control · Mathematics 2023-09-07 Franco Galante , Chiara Ravazzi , Michele Garetto , Emilio Leonardi

This document provides the analytic plan for evaluating adult HIV incidence, health, and implementation outcomes for the first phase of the SEARCH Study. Locked: November 27, 2017. Embargoed until July 25, 2018.

HIV-1 can disseminate between susceptible cells by two mechanisms: cell-free infection following fluid-phase diffusion of virions and by highly-efficient direct cell-to-cell transmission at immune cell contacts. The contribution of this…

Populations and Evolution · Quantitative Biology 2024-01-02 Changwang Zhang , Shi Zhou , Elisabetta Groppelli , Pierre Pellegrino , Ian Williams , Persephone Borrow , Benjamin M. Chain , Clare Jolly
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