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We review a scalable two- and three-dimensional computer code for low-temperature plasma simulations in multi-material complex geometries. Our approach is based on embedded boundary (EB) finite volume discretizations of the minimal…

Computational Physics · Physics 2019-05-01 Robert Marskar

The three-dimensional dynamics of a single non-Brownian flexible fiber in shear flow is evaluated numerically, in the absence of inertia. A wide range of ratios A of bending to hydrodynamic forces and hundreds of initial configurations are…

Soft Condensed Matter · Physics 2020-02-12 A. M. Slowicka , H. A. Stone , M. L. Ekiel-Jezewska

We develop a Fluctuating Immersed Boundary (FIB) method for performing Brownian dynamics simulations of confined particle suspensions. Unlike traditional methods which employ analytical Green's functions for Stokes flow in the confined…

Soft Condensed Matter · Physics 2015-06-29 S. Delong , F. Balboa Usabiaga , R. Delgado-Buscalioni , B. E. Griffith , A. Donev

We apply the immersed boundary (or IB) method to simulate deformation and detachment of a periodic array of wall-bounded biofilm colonies in response to a linear shear flow. The biofilm material is represented as a network of Hookean…

Fluid Dynamics · Physics 2016-11-01 Rangarajan Sudarsan , Sudeshna Ghosh , John M. Stockie , Hermann J. Eberl

In this paper, a three-dimensional numerical solver is developed for suspensions of rigid and soft particles and droplets in viscoelastic and elastoviscoplastic (EVP) fluids. The presented algorithm is designed to allow for the first time…

We extend the recently introduced divergence-conforming immersed boundary (DCIB) method [1] to fluid-structure interaction (FSI) problems involving closed co-dimension one solids. We focus on capsules and vesicles, whose discretization is…

A discrete unified gas kinetic scheme (DUGKS) coupled with the immersed boundary (IB) method is developed to perform interface-resolved simulation of particle-laden flows. The present method (IB-DUGKS) preserves the respective advantages of…

Fluid Dynamics · Physics 2018-10-17 Shi Tao , Haolong Zhang , Zhaoli Guo , Lian-Ping Wang

An important class of fluid-structure problems involve the dynamics of ordered arrays of immersed, flexible fibers. While specialized numerical methods have been developed to study fluid-fiber systems, they become infeasible when there are…

Fluid Dynamics · Physics 2019-07-17 David B. Stein , Michael J. Shelley

We present a framework for Large Eddy Simulations (LES) with Immersed Boundaries (IBs) to simulate high Reynolds number flows over complex walls. In this approach, which we call Immersed Boundary-Modeled LES (IBMLES), we volume-filter the…

Fluid Dynamics · Physics 2025-11-03 Morrison Rickard , M. Houssem Kasbaoui

Micro-organisms usually can swim in their liquid environment by flagellar or ciliary beating. In this numerical work, we analyze the influence of flagellar beating on the orbits of a swimming cell in a shear flow. We also calculate the…

Soft Condensed Matter · Physics 2017-11-21 Levan Jibuti , Walter Zimmermann , Salima Rafaï , Philippe Peyla

When particulate suspensions are sheared, perturbations in the shear flows around the rigid particles increase the local energy dissipation, so that the viscosity of the suspension is effectively higher than that of the solvent. For bulk…

Soft Condensed Matter · Physics 2009-11-13 Mark L. Henle , Alex J. Levine

The immersed boundary (IB) method is a general mathematical framework for studying problems involving fluid-structure interactions in which an elastic structure is immersed in a viscous incompressible fluid. In the IB formulation, the fluid…

Numerical Analysis · Mathematics 2020-10-01 Yuanxun Bao , Alexander D. Kaiser , Jason Kaye , Charles S. Peskin

Strongly coupled immersed boundary (IB) methods solve the nonlinear fluid and structural equations of motion simultaneously for strongly enforcing the no-slip constraint on the body. Handling this constraint requires solving several large…

Fluid Dynamics · Physics 2021-03-12 Nirmal Jayaprasad Nair , Andres Goza

The immersed boundary method (IB) is an elegant way to fully couple the motion of a fluid and deformations of an immersed elastic structure. In that vein, the IB2d software allows for expedited explorations of fluid-structure interaction…

Fluid Dynamics · Physics 2018-09-19 Nicholas Battista , Christopher Strickland , Aaron Barrett , Laura Miller

The Immersed Boundary (IB) method is a mathematical framework for constructing robust numerical methods to study fluid-structure interaction in problems involving an elastic structure immersed in a viscous fluid. The IB formulation uses an…

Numerical Analysis · Mathematics 2017-08-23 Yuanxun Bao , Aleksandar Donev , Boyce E. Griffith , David M. McQueen , Charles S. Peskin

The Immersed Boundary (IB) method is a widely-used numerical methodology for the simulation of fluid-structure interaction problems. The IB method utilizes an Eulerian discretization for the fluid equations of motion while maintaining a…

Numerical Analysis · Mathematics 2012-10-09 Varun Shankar , Grady B. Wright , Aaron L. Fogelson , R. M. Kirby

We numerically investigate the effects of fiber aspect ratio, roughness, flexibility, and flow inertia on the rheology of concentrated suspensions. We perform direct numerical simulations modeling the fibers, suspended in an incompressible…

Fluid Dynamics · Physics 2025-01-23 Monsurul Khan , Rishabh V. More , Arash Alizad Banaei , Luca Brandt , Arezoo M. Ardekani

This paper presents a general and robust method for the fluid-structure interaction of membranes and shells undergoing large displacement and large added-mass effects by coupling an immersed-boundary method with a shell finite-element…

Fluid Dynamics · Physics 2023-08-15 Marin Lauber , Gabriel D. Weymouth , Georges Limbert

This paper presents an immersed boundary (IB) method for fluid--structure--acoustics interactions involving large deformations and complex geometries. In this method, the fluid dynamics is solved by a finite difference method where the…

Fluid Dynamics · Physics 2020-05-20 Li Wang , Fang-Bao Tian , Joseph C. S. Lai

We develop numerical methods to simulate the fluid-mechanical erosion of many bodies in two-dimensional Stokes flow. The broad aim is to simulate the erosion of a porous medium (e.g. groundwater flow) with grain-scale resolution. Our fluid…

Numerical Analysis · Mathematics 2018-09-26 Bryan D. Quaife , M. Nicholas J. Moore