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We introduce a new metric of match, called Cartesian tree matching, which means that two strings match if they have the same Cartesian trees. Based on Cartesian tree matching, we define single pattern matching for a text of length n and a…

Data Structures and Algorithms · Computer Science 2019-05-23 Sung Gwan Park , Amihood Amir , Gad M. Landau , Kunsoo Park

We give an algorithm to enumerate the results on trees of monadic second-order (MSO) queries represented by nondeterministic tree automata. After linear time preprocessing (in the input tree), we can enumerate answers with linear delay (in…

Databases · Computer Science 2019-08-28 Antoine Amarilli , Pierre Bourhis , Stefan Mengel , Matthias Niewerth

This article addresses the problem of automatically generating attack trees that soundly and clearly describe the ways the system can be attacked. Soundness means that the attacks displayed by the attack tree are indeed attacks in the…

Cryptography and Security · Computer Science 2024-07-11 Olga Gadyatskaya , Sjouke Mauw , Rolando Trujillo-Rasuac , Tim A. C. Willemse

We show that there exists an adjacency labelling scheme for planar graphs where each vertex of an $n$-vertex planar graph $G$ is assigned a $(1+o(1))\log_2 n$-bit label and the labels of two vertices $u$ and $v$ are sufficient to determine…

Data Structures and Algorithms · Computer Science 2021-12-03 Vida Dujmović , Louis Esperet , Gwenaël Joret , Cyril Gavoille , Piotr Micek , Pat Morin

Suffix trees are an important data structure at the core of optimal solutions to many fundamental string problems, such as exact pattern matching, longest common substring, matching statistics, and longest repeated substring. Recent lines…

Data Structures and Algorithms · Computer Science 2022-08-31 Nicola Rizzo , Alexandru I. Tomescu , Alberto Policriti

This note is dedicated to presenting a polynomial analogue of $(n+1)!C_n=2^n(2n-1)!!$ (with $C_n$ as the $n$-th Catalan number) in the context of labeled plane trees and increasing plane trees, based on the definition of improper edges in…

Combinatorics · Mathematics 2025-10-06 Lora R. Du , Kathy Q. Ji , Dax T. X. Zhang

Natural language text corpora are often available as sets of syntactically parsed trees. A wide range of expressive tree queries are possible over such parsed trees that open a new avenue in searching over natural language text. They not…

Databases · Computer Science 2012-08-02 Pirooz Chubak , Davood Rafiei

We consider multi-label classification where the goal is to annotate each data point with the most relevant $\textit{subset}$ of labels from an extremely large label set. Efficient annotation can be achieved with balanced tree predictors,…

Machine Learning · Computer Science 2020-06-11 Maryam Majzoubi , Anna Choromanska

We compare the phylogenetic tensors for various trees and networks for two, three and four taxa. If the probability spaces between one tree or network and another are not identical then there will be phylogenetic tensors that could have…

Populations and Evolution · Quantitative Biology 2016-06-24 Jonathan Mitchell

We introduce an encoding for parsing as sequence labeling that can represent any projective dependency tree as a sequence of 4-bit labels, one per word. The bits in each word's label represent (1) whether it is a right or left dependent,…

Computation and Language · Computer Science 2023-10-24 Carlos Gómez-Rodríguez , Diego Roca , David Vilares

A distance labeling scheme labels the $n$ nodes of a graph with binary strings such that, given the labels of any two nodes, one can determine the distance in the graph between the two nodes by looking only at the labels. A $D$-preserving…

Data Structures and Algorithms · Computer Science 2016-09-09 Stephen Alstrup , Søren Dahlgaard , Mathias Bæk Tejs Knudsen , Ely Porat

It is known that graphs on n vertices with minimum degree at least 3 have spanning trees with at least n/4+2 leaves and that this can be improved to (n+4)/3 for cubic graphs without the diamond K_4-e as a subgraph. We generalize the second…

Combinatorics · Mathematics 2007-07-19 Paul Bonsma , Florian Zickfeld

We consider the problem of enumerating, for a given directed graph $G=(V,E)$ and a node $r\in V$, all directed spanning trees of $G$ rooted at $r$. For undirected graphs, the corresponding problem of enumerating all spanning trees has…

Data Structures and Algorithms · Computer Science 2026-03-13 Paweł Gawrychowski , Marcin Knapik

Bayesian inference is now a leading technique for reconstructing phylogenetic trees from aligned sequence data. In this short note, we formally show that the maximum posterior tree topology provides a statistically consistent estimate of a…

Populations and Evolution · Quantitative Biology 2013-07-12 Mike Steel

Guessing Random Additive Noise Decoding (GRAND) and its variants, known for their near-maximum likelihood performance, have been introduced in recent years. One such variant, Segmented GRAND, reduces decoding complexity by generating only…

Information Theory · Computer Science 2025-12-19 Lukas Rapp , Jiewei Feng , Muriel Médard , Ken R. Duffy

For a labeled tree on the vertex set $\set{1,2,\ldots,n}$, the local direction of each edge $(i\,j)$ is from $i$ to $j$ if $i<j$. For a rooted tree, there is also a natural global direction of edges towards the root. The number of edges…

Combinatorics · Mathematics 2022-03-22 Heesung Shin , Jiang Zeng

The celebrated result of Koml\'os, S\'ark\"ozy, and Szemer\'edi states that for any $\varepsilon>0$, there exists $0<c<1$, such that for all sufficiently large $n$, every $n$-vertex graph $G$ with $\delta(G)\geq(1/2+\varepsilon)n$ contains…

Combinatorics · Mathematics 2025-10-21 Jun Yan

Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…

Data Structures and Algorithms · Computer Science 2011-01-19 Philip Bille , Inge Li Goertz

The {\sc Directed Maximum Leaf Out-Branching} problem is to find an out-branching (i.e. a rooted oriented spanning tree) in a given digraph with the maximum number of leaves. In this paper, we improve known parameterized algorithms and…

Data Structures and Algorithms · Computer Science 2007-07-10 Noga Alon , Fedor V. Fomin , Gregory Gutin , Michael Krivelevich , Saket Saurabh

In deep neural networks, better results can often be obtained by increasing the complexity of previously developed basic models. However, it is unclear whether there is a way to boost performance by decreasing the complexity of such models.…

Machine Learning · Computer Science 2022-06-07 Junran Wu , Shangzhe Li , Jianhao Li , Yicheng Pan , Ke Xu