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Related papers: Multicore Homology via Mayer Vietoris

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Persistent homology provides a new approach for the topological simplification of big data via measuring the life time of intrinsic topological features in a filtration process and has found its success in scientific and engineering…

Biomolecules · Quantitative Biology 2014-12-09 Bao Wang , Guo-Wei Wei

The Mayer-Vietoris theorem is known for its wide applications, especially in determining homology. In fact, this theorem provides us with a long exact sequence, where the underlying homology groups fit in. However, this theorem does not…

Combinatorics · Mathematics 2026-03-16 Sajal Mukherjee , Pritam Chandra Pramanik , Arundhati Rakshit

Recently, multi-scale notions of local homology (a variant of persistent homology) have been used to study the local structure of spaces around a given point from a point cloud sample. Current reconstruction guarantees rely on constructing…

Computational Geometry · Computer Science 2013-04-24 Primoz Skraba , Bei Wang

We describe, study, and experiment with an algorithm for finding all solutions of systems of polynomial equations using homotopy continuation and monodromy. This algorithm follows a framework developed in previous work and can operate in…

Symbolic Computation · Computer Science 2018-06-01 Nathan Bliss , Timothy Duff , Anton Leykin , Jeff Sommars

In data clustering, it is often desirable to find not just a single partition into clusters but a sequence of partitions that describes the data at different scales (or levels of coarseness). A natural problem then is to analyse and compare…

Algebraic Topology · Mathematics 2025-04-25 Juni Schindler , Mauricio Barahona

An algorithm is presented that constructs an acyclic partial matching on the cells of a given simplicial complex from a vector-valued function defined on the vertices and extended to each simplex by taking the least common upper bound of…

Computational Geometry · Computer Science 2017-03-24 Madjid Allili , Tomasz Kaczynski , Claudia Landi , Filippo Masoni

To prepare images for better segmentation, we need preprocessing applications, such as smoothing, to reduce noise. In this paper, we present an enhanced computation method for smoothing 2D object in binary case. Unlike existing approaches,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-03-31 Ramzi Mahmoudi , Mohamed Akil

AI kernel compilation for edge devices depends on the compiler's ability to exploit parallelism and hide memory latency in the presence of hierarchical memory and explicit data movement. This paper reports a benchmark methodology and…

Programming Languages · Computer Science 2026-02-25 Javed Absar , Samarth Narang , Muthu Baskaran

Similarities are noted in two Mayer-Vietoris spectral sequences that generalize to any number of ideals in the Mayer-Vietoris exact sequence in local cohomology for two ideals. One has as first terms \v{C}ech cohomology with respect to sums…

Commutative Algebra · Mathematics 2023-06-06 Marc Chardin , Rafael Holanda , José Naéliton

A persistence module $M$, with coefficients in a field $\mathbb{F}$, is a finite-dimensional linear representation of an equioriented quiver of type $A_n$ or, equivalently, a graded module over the ring of polynomials $\mathbb{F}[x]$. It is…

Algebraic Topology · Mathematics 2025-11-06 Alessandro De Gregorio , Marco Guerra , Sara Scaramuccia , Francesco Vaccarino

Multi-parameter persistent homology naturally arises in applications of persistent topology to data that come with extra information depending on additional parameters, like for example time series data. We introduce the concept of a…

A crucial step in the analysis of persistent homology is the transformation of data into an appropriate topological object (in our case, a simplicial complex). Modern packages for persistent homology often construct Vietoris--Rips or other…

Computational Geometry · Computer Science 2019-09-18 Michelle Feng , Mason A. Porter

The described works have been carried out in the framework of a mid-term study initiated by the Centre Electronique de l'Armement, then by an advanced study launched by the Direction de la Recherche et des Etudes Technologiques in France in…

Computational Geometry · Computer Science 2016-05-04 Olivier Guye

The theory of multidimensional persistent homology was initially developed in the discrete setting, and involved the study of simplicial complexes filtered through an ordering of the simplices. Later, stability properties of…

Computational Geometry · Computer Science 2013-03-28 Niccolò Cavazza , Marc Ethier , Patrizio Frosini , Tomasz Kaczynski , Claudia Landi

Clearing is a simple but effective optimization for the standard algorithm of persistent homology (PH), which dramatically improves the speed and scalability of PH computations for Vietoris--Rips filtrations. Due to the quick growth of the…

Algebraic Topology · Mathematics 2023-08-04 Ulrich Bauer , Fabian Lenzen , Michael Lesnick

In this paper, we study the discrete differential calculus on hypergraphs by using the Kouzul complexes. We define the constrained (co)homology for hypergraphs and give the corresponding Mayer-Vietoris sequences. We prove the functoriality…

Algebraic Topology · Mathematics 2023-10-24 Shiquan Ren

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

Persistent homology has emerged as a novel tool for data analysis in the past two decades. However, there are still very few shapes or even manifolds whose persistent homology barcodes (say of the Vietoris-Rips complex) are fully known.…

Metric Geometry · Mathematics 2018-07-31 Henry Adams , Samir Chowdhury , Adam Quinn Jaffe , Bonginkosi Sibanda

Heterogeneous many-cores are now an integral part of modern computing systems ranging from embedding systems to supercomputers. While heterogeneous many-core design offers the potential for energy-efficient high-performance, such potential…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-11 Jianbin Fang , Chun Huang , Tao Tang , Zheng Wang

This article introduces a highly parallel algorithm for molecular dynamics simulations with short-range forces on single node multi- and many-core systems. The algorithm is designed to achieve high parallel speedups for strongly…

Computational Physics · Physics 2013-11-20 R. Meyer