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Bacterial colonies can form a wide variety of shapes and structures based on ambient and internal conditions. To help understand the mechanisms that determine the structure of and the diversity within these colonies, various numerical…

Soft Condensed Matter · Physics 2024-12-24 Bryan Verhoef , Rutger Hermsen , Joost de Graaf

Complex fluid-fluid interfaces featuring mesoscale structures with adsorbed particles are key components of newly designed materials which are continuously enriching the field of soft matter. Simulation tools which are able to cope with the…

Soft Condensed Matter · Physics 2014-02-24 Marcello Sega , Mauro Sbragaglia , Sofia Sergeevna Kantorovich , Alexey Olegovich Ivanov

Immiscible fluid displacement in porous media occurs in several natural and industrial processes. For example, during petroleum extraction from porous rock reservoirs, water is used to displace oil. In this paper, we investigate primary…

Fluid Dynamics · Physics 2022-02-03 M. Sedahmed , R. C. V. Coelho , H. A. Warda

In equilibrium and supercooled liquids, polymorphism is manifested by thermodynamic regions defined in the phase diagram, which are predominantly of different short- and medium-range order (local structure). It is found that on the phase…

Soft Condensed Matter · Physics 2024-03-19 Anatolii V. Mokshin , Roman V. Vlasov

We apply to a liquid of linear molecules the semischematic mode-coupling model, previously introduced to describe the center of mass (COM) slow dynamics of a network-forming molecular liquid. We compare the theoretical predictions and…

Soft Condensed Matter · Physics 2009-10-31 Linda Fabbian , Rolf Schilling , Francesco Sciortino , Piero Tartaglia , Christoph Theis

We present a systematic study of capillary filling for a binary fluid by using a mesoscopic lattice Boltzmann model for immiscible fluids describing a diffusive interface moving at a given contact angle with respect to the walls. The…

Fluid Dynamics · Physics 2009-11-13 S. Chibbaro

We present a model for the efficient simulation of generic bilayer membranes. Individual lipids are represented by one head- and two tail-beads. By means of simple pair potentials these robustly self-assemble to a fluid bilayer state over a…

Soft Condensed Matter · Physics 2009-11-11 Ira R. Cooke , Kurt Kremer , Markus Deserno

We present a Lattice-Boltzmann method for simulating self-propelling (active) colloidal particles in two-dimensions. Active particles with symmetric and asymmetric force distribution on its surface are considered. The velocity field…

Soft Condensed Matter · Physics 2009-11-11 Sanoop Ramachandran , P. B. Sunil Kumar , I. Pagonabarraga

In this paper, we consider a class of models for multiphase fluids, in the framework of mixture theory. The considered system, in its more general form, contains both the gradient of a hydrostatic pressure, generated by an incompressibility…

Analysis of PDEs · Mathematics 2016-10-14 Roberta Bianchini , Roberto Natalini

We develop a lattice Boltzmann equation method for simulating multi-phase immiscible fluid flows with variation of density and viscosity, based on the model proposed by Gunstensen {\em et al} for two-component immiscible fluids. The…

comp-gas · Physics 2009-10-22 Daryl Grunau , Shiyi Chen , Kenneth Egger

This paper describes the use of simple lattice models for studying the properties of structurally disordered systems like glasses and granulates. The models considered have crystalline states as ground states, finite connectivity, and are…

Statistical Mechanics · Physics 2015-06-24 Alberto Petri

We study the deformation and dynamics of droplets in time-dependent flows using 3D numerical simulations of two immiscible fluids based on the lattice Boltzmann model (LBM). Analytical models are available in the literature, which assume…

Fluid Dynamics · Physics 2018-01-17 F. Milan , M. Sbragaglia , L. Biferale , F. Toschi

We propose numerical simulations of viscoelastic fluids based on a hybrid algorithm combining Lattice-Boltzmann models (LBM) and Finite Differences (FD) schemes, the former used to model the macroscopic hydrodynamic equations, and the…

Computational Physics · Physics 2016-07-26 A. Gupta , M. Sbragaglia , A. Scagliarini

Detailed study of spectral properties and of linear stability is presented for a class of lattice Boltzmann models with a non-ideal equation of state. Examples include the van der Waals and the shallow water models. Both analytical and…

Numerical Analysis · Mathematics 2025-03-12 S. A. Hosseini , I. V. Karlin

Systems of charged particles on anisotropic three-dimensional lattices are investigated theoretically using Debye-Huckel theory. It is found that the thermodynamics of these systems strongly depends on the degree of anisotropy. For weakly…

Statistical Mechanics · Physics 2009-11-07 Vladimir Kobelev , Anatoly B. Kolomeisky

We introduce a microscopic model of a lipid with a charged headgroup and flexible hydrophobic tails, a neutral solvent, and counter ions. Short-ranged interactions between hydrophilic and hydrophobic moieties are included as are the Coulomb…

Soft Condensed Matter · Physics 2009-10-31 Xiao-jun Li , M. Schick

We have conducted a triple-scale simulation of liquid water by concurrently coupling atomistic, mesoscopic, and continuum models of the liquid. The presented triple-scale hydrodynamic solver for molecular liquids enables the insertion of…

Soft Condensed Matter · Physics 2009-12-29 Rafael Delgado-Buscalioni , Kurt Kremer , Matej Praprotnik

The thermodynamic and kinetics of the one dimensional lattice gas with repulsive interaction is investigated using transfer matrix technique and Monte Carlo simulations. This simple model is shown to exhibit waterlike anomalies in density,…

The separation between molecular and mesoscopic length and time scales poses a severe limit to molecular simulations of mesoscale phenomena. We describe a hybrid multiscale computational technique which address this problem by keeping the…

Fluid Dynamics · Physics 2009-11-13 G. De Fabritiis , R. Delgado-Buscalioni , P. V. Coveney

In this work we explore the one-dimensional extended Hubbard model as a fluid system modelling liquid phases of different densities. This model naturally displays two length scales of interaction, which are connected with waterlike…

Statistical Mechanics · Physics 2023-10-10 Marco A. Habitzreuter , Eduardo O. Rizzatti , Marcia C. Barbosa