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The modern scale of data has brought new challenges to Bayesian inference. In particular, conventional MCMC algorithms are computationally very expensive for large data sets. A promising approach to solve this problem is embarrassingly…

Machine Learning · Statistics 2015-10-27 Xiangyu Wang , Fangjian Guo , Katherine A. Heller , David B. Dunson

We give an algorithm for finding the arboricity of a weighted, undirected graph, defined as the minimum number of spanning forests that cover all edges of the graph, in $\sqrt{n} m^{1+o(1)}$ time. This improves on the previous best bound of…

Data Structures and Algorithms · Computer Science 2025-07-22 Ruoxu Cen , Henry Fleischmann , George Z. Li , Jason Li , Debmalya Panigrahi

In the laminar-constrained spanning tree problem, the goal is to find a minimum-cost spanning tree which respects upper bounds on the number of times each cut in a given laminar family is crossed. This generalizes the well-studied…

Data Structures and Algorithms · Computer Science 2023-04-18 Nathan Klein , Neil Olver

The quadratic minimum spanning tree problem (QMSTP) is the problem of finding a spanning tree of a graph such that the total interaction cost between pairs of edges in the tree is minimized. We first show that most of the bounding…

Optimization and Control · Mathematics 2024-04-09 Renata Sotirov , Zoe Verchére

Spanning trees are an important primitive in many data analysis tasks, when a data set needs to be summarized in terms of its "skeleton", or when a tree-shaped graph over all observations is required for downstream processing. Popular…

Discrete Mathematics · Computer Science 2024-04-10 Enrique Fita Sanmartín , Christoph Schnörr , Fred A. Hamprecht

We show how to find and efficiently maintain maximal k-edge-connected subgraphs in undirected graphs. In particular, we provide the following results. (1) A general framework for maintaining the maximal k-edge-connected subgraphs upon…

Data Structures and Algorithms · Computer Science 2023-05-02 Loukas Georgiadis , Giuseppe F. Italiano , Evangelos Kosinas , Debasish Pattanayak

Edit distances between merge trees of scalar fields have many applications in scientific visualization, such as ensemble analysis, feature tracking or symmetry detection. In this paper, we propose branch mappings, a novel approach to the…

Computational Geometry · Computer Science 2022-08-12 Florian Wetzels , Heike Leitte , Christoph Garth

Recent years have witnessed a surge of biological interest in the minimum spanning tree (MST) problem for its relevance to automatic model construction using the distances between data points. Despite the increasing use of MST algorithms…

Quantitative Methods · Quantitative Biology 2015-11-02 Momoko Hayamizu , Hiroshi Endo , Kenji Fukumizu

In this work, we study methodical decomposition of an undirected, unweighted complete graph ($K_n$ of order $n$, size $m$) into minimum number of edge-disjoint trees. We find that $x$, a positive integer, is minimum and…

Discrete Mathematics · Computer Science 2024-05-30 Antika Sinha , Sanjoy Kumar Saha , Partha Basuchowdhuri

This paper investigates the execution of tree-shaped task graphs using multiple processors. Each edge of such a tree represents a large IO file. A task can only be executed if all input and output files fit into memory, and a file can only…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-10-10 Loris Marchal , Oliver Sinnen , Frédéric Vivien

In recent years there has been a paradigm shift from the study of local task-related activation to the organization and functioning of large-scale functional and structural brain networks. However, a long-standing challenge in this…

Quantitative Methods · Quantitative Biology 2025-11-26 Sixtus Dakurah

We present a dynamic algorithm for maintaining the connected and 2-edge-connected components in an undirected graph subject to edge deletions. The algorithm is Monte-Carlo randomized and processes any sequence of edge deletions in $O(m + n…

Data Structures and Algorithms · Computer Science 2021-11-22 Anders Aaman , Adam Karczmarz , Jakub Łącki , Nikos Parotsidis , Peter M. R. Rasmussen , Mikkel Thorup

In real life, it is always an urge to reach our goal in minimum effort i.e., it should have a minimum constrained path. The path may be shortest route in practical life, either physical or electronic medium. The scenario is to represents…

Neural and Evolutionary Computing · Computer Science 2014-01-14 Sounak Sadhukhan , Samar Sen Sarma

Minimum Spanning Trees are a well-studied subset of graph problems. While classical algorithms have existed to solve these problems for decades, new variations and application areas are constantly being discovered. When dealing with large…

Data Structures and Algorithms · Computer Science 2023-12-29 Arjun Bhalla

In the PATH COVER problem, one asks to cover the vertices of a graph using the smallest possible number of (not necessarily disjoint) paths. While the variant where the paths need to be pairwise vertex-disjoint, which we call PATH…

Data Structures and Algorithms · Computer Science 2025-11-11 Florent Foucaud , Atrayee Majumder , Tobias Mömke , Aida Roshany-Tabrizi

We study the complexity of finding communication trees with the lowest possible completion time for rooted, irregular gather and scatter collective communication operations in fully connected, $k$-ported communication networks under a…

Computational Complexity · Computer Science 2018-11-28 Jesper Larsson Träff

Probabilistic distributions over spanning trees in directed graphs are a fundamental model of dependency structure in natural language processing, syntactic dependency trees. In NLP, dependency trees often have an additional root…

Computation and Language · Computer Science 2022-07-11 Ran Zmigrod , Tim Vieira , Ryan Cotterell

We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…

Data Structures and Algorithms · Computer Science 2020-07-08 Luís M. S. Russo , Andreia Sofia Teixeira , Alexandre P Francisco

We show that the problem of constructing tree-structured descriptions of data layouts that are optimal with respect to space or other criteria from given sequences of displacements, can be solved in polynomial time. The problem is relevant…

Data Structures and Algorithms · Computer Science 2015-07-01 Robert Ganian , Martin Kalany , Stefan Szeider , Jesper Larsson Träff

Spanning tree problems with specialized constraints can be difficult to solve in real-world scenarios, often requiring intricate algorithmic design and exponential time. Recently, there has been growing interest in end-to-end deep neural…

Machine Learning · Computer Science 2023-06-13 Yuchen Shi , Congying Han , Tiande Guo