Related papers: On the longest k-alternating subsequence

We present an algorithm computing the longest periodic subsequence of a string of length $n$ in $O(n^7)$ time with $O(n^4)$ words of space. We obtain improvements when restricting the exponents or extending the search allowing the reported…

In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…

Let $L(n,k,r,p)$ denote the minimum number of $k$-subsets of an $n$-set such that all the $\binom{n}{p}$ $p$-subsets are intersected by one of them in at least $r$ elements. The case $p=r$ corresponds to the covering numbers, while the case…

Randomly sampling an acyclic orientation on the complete bipartite graph $K_{n,k}$ with parts of size $n$ and $k$, we investigate the length of the longest path. We provide a probability generating function for the distribution of the…

Say that a permutation of $1,2,\ldots,n$ is \textit{$k$-bounded} if every pair of consecutive entries in the permutation differs by no more than $k$. Such a permutation is \textit{anchored} if the first entry is $1$ and the last entry is…

We prove that the number of copies of any given permutation pattern $q$ has an asymptotically normal distribution in random permutations.

For any synchronizing $n$-state deterministic automaton, \v{C}ern\'{y} conjectures the existence of a synchronizing word of length at most $(n-1)^2$. We prove that there exists a synchronizing word of length at most $2n^2 - 7n + 7$ for…

Let R(n,k) denote the number of permutations of {1,2,...,n} with k alternating runs. We find a grammatical description of the numbers R(n,k) and then present several convolution formulas involving the generating function for the numbers…

Let $n_k(s)$ be the maximal length $n$ such that a quaternary additive $[n,k,n-s]_4$-code exists. We solve a natural asymptotic problem by determining the lim sup $\lambda_k$ of $n_k(s)/s,$ and the smallest value of $s$ such that…

We provide a cyclic permutation analogue of the Erd\H os-Szekeres theorem. In particular, we show that every cyclic permutation of length $(k-1)(\ell-1)+2$ has either an increasing cyclic sub-permutation of length $k+1$ or a decreasing…

We determine the asymptotic proportion of minimal automata, within n-state accessible deterministic complete automata over a k-letter alphabet, with the uniform distribution over the possible transition structures, and a binomial…

We prove that the commutator is stable in permutations endowed with the Hamming distance, that is, two permutations that almost commute are near two commuting permutations. Our result extends to $k$-tuples of almost commuting permutations,…

Finding an Approximate Longest Common Substring (ALCS) within a given set $S=\{s_1,s_2,\ldots,s_m\}$ of $m \ge 2$ strings is a key problem in computational biology, such as identifying related mutations across multiple genetic sequences. We…

The authors consider the length, $l_N$, of the length of the longest increasing subsequence of a random permutation of $N$ numbers. The main result in this paper is a proof that the distribution function for $l_N$, suitably centered and…

We discuss the length of the longest cycle in a sparse random graph $G_{n,p},p=c/n$. $c$ constant. We show that for large $c$ there is a function $f(c)$ such that $L_n(c)/n\to f(c)$ a.s. The function $f(c)=1-\sum_{k=1}^\infty p_k(c)e^{-kc}$…

A superpermutation on $n$ symbols is a string that contains each of the $n!$ permutations of the $n$ symbols as a contiguous substring. The shortest superpermutation on $n$ symbols was conjectured to have length $\sum_{i=1}^n i!$. The…

We improve the lower bound on the number of permutations of {1,2,...,n} in which no 3-term arithmetic progression occurs as a subsequence, and derive lower bounds on the upper and lower densities of subsets of the positive integers that can…

For a finite set $A$ of size $n$, an ordering is an injection from $\{1,2,\ldots,n\}$ to $A$. We present results concerning the asymptotic properties of the length $L_n$ of the longest arithmetic subsequence in a random ordering of an…

The set of all $ q $-ary strings that do not contain repeated substrings of length $ \leqslant\! 3 $ (i.e., that do not contain substrings of the form $ a a $, $ a b a b $, and $ a b c a b c $) constitutes a code correcting an arbitrary…

We prove a central limit theorem for the length of the longest subsequence of a random permutation which follows one of a class of repeating patterns. This class includes every fixed pattern of ups and downs having at least one of each,…