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Mathematical models are increasingly a part of microbiological research. Here, we share our perspective on how modeling advances the discipline by: (i) enforcing logical consistency, (ii) enabling quantitative prediction, (iii) extracting…

Other Quantitative Biology · Quantitative Biology 2026-04-22 Jamie A. Lopez , Amir Erez

Preprocessing forms an oft-neglected foundation for a wide range of statistical and scientific analyses. However, it is rife with subtleties and pitfalls. Decisions made in preprocessing constrain all later analyses and are typically…

Statistics Theory · Mathematics 2013-09-27 Alexander W. Blocker , Xiao-Li Meng

Consistent confirmations obtained independently of each other lend credibility to a scientific result. We refer to results satisfying this consistency as reproducible and assume that reproducibility is a desirable property of scientific…

Other Statistics · Statistics 2019-06-19 Berna Devezer , Luis G. Nardin , Bert Baumgaertner , Erkan Buzbas

The nanophysics is halfway between the size scales of quantum mechanics and macroscopic physics governed by the laws of Newton and Einstein. The correct definition of nanophysics is the physics of structures and artefacts with dimensions in…

Popular Physics · Physics 2016-06-29 E. Catalano

Classical linear wave superposition produces the appearance of interference. This observation can be interpreted in two equivalent ways: one can assume that interference is an illusion because input components remain unperturbed, or that…

Quantum Physics · Physics 2013-07-17 Ghenadie N. Mardari , James A. Greenwood

I show that whenever a system undergoes a reproducible macroscopic process the mutual distinguishability of macrostates, as measured by their relative entropy, diminishes. This extends the second law which regards only ordinary entropies,…

Quantum Physics · Physics 2010-08-10 Jochen Rau

Although osmosis is a familiar phenomenon, and of pivotal importance in natural systems, it is seldom explained how it might work on the molecular level (if treated at all in physics text books). The standard treatment of osmosis in…

General Physics · Physics 2007-05-23 Frank G. Borg

Quantum theory's irreducible empirical core is a probability calculus. While it presupposes the events to which (and on the basis of which) it serves to assign probabilities, and therefore cannot account for their occurrence, it has to be…

Quantum Physics · Physics 2014-11-03 Ulrich Mohrhoff

A basic postulate of modern compositional approaches to generalised physical theories is the generalised Born rule, in which probabilities are postulated to be computable from the composition of states and effects. In this paper we consider…

Quantum Physics · Physics 2026-03-20 Gaurang Agrawal , Matt Wilson

A vast body of literature addresses the complex nature of science's reproducibility crisis. In contrast with this perceived complexity, some recent papers from the discipline of physics suggests that irreproducibility does not point to a…

Physics and Society · Physics 2021-07-16 Andrea Saltelli , Monica Di Fiore , Francesco Spanò

This work leverages recent advances in probabilistic machine learning to discover conservation laws expressed by parametric linear equations. Such equations involve, but are not limited to, ordinary and partial differential,…

Machine Learning · Computer Science 2017-09-13 Maziar Raissi , George Em. Karniadakis

A reliable understanding of the Earth system is essential for the life quality of modern society. Natural hazards are the cause of most life and resource losses. The ability to define the conditions for a sustainable development of…

Chaotic Dynamics · Physics 2025-04-08 Jürgen Kurths , Ankit Agarwal , Ugur Öztürk , Shubham Sharma , Norbert Marwan , Deniz Eroglu

We develop an extension of the process matrix (PM) framework for correlations between quantum operations with no causal order that allows multiple rounds of information exchange for each party compatibly with the assumption of well-defined…

Quantum Physics · Physics 2021-01-27 Timothée Hoffreumon , Ognyan Oreshkov

State-of-the-art NLP methods achieve human-like performance on many tasks, but make errors nevertheless. Characterizing these errors in easily interpretable terms gives insight into whether a classifier is prone to making systematic errors,…

Computation and Language · Computer Science 2023-11-21 Michael A. Hedderich , Jonas Fischer , Dietrich Klakow , Jilles Vreeken

A natural process is defined as an act, by which a system organizes itself with time. Any natural process drives a system to a state of greater organization. Organization is a progressive change, while evolution is expressed in the effects…

Adaptation and Self-Organizing Systems · Physics 2012-01-09 Atanu Bikash Chatterjee

Full formal descriptions of algorithms making use of quantum principles must take into account both quantum and classical computing components, as well as communications between these components. Moreover, to model concurrent and…

Quantum Physics · Physics 2007-05-23 Marie Lalire

This paper is concerned with complex macroscopic behaviour arising in many-body systems through the combinations of competitive interactions and disorder, even with simple ingredients at the microscopic level. It attempts to indicate and…

Disordered Systems and Neural Networks · Physics 2015-05-13 David Sherrington

The observed general time-asymmetric behavior of macroscopic systems -- embodied in the second law of thermodynamics -- arises naturally from time-symmetric microscopic laws due to the great disparity between macro and micro-scales. More…

Condensed Matter · Physics 2007-05-23 Joel L. Lebowitz

When we work with information from multiple sources, the formalism each employs to handle uncertainty may not be uniform. In order to be able to combine these knowledge bases of different formats, we need to first establish a common basis…

Artificial Intelligence · Computer Science 2013-02-18 Choh Man Teng

We propose a simple "evolutionary" sandpile model exhibiting self-organised criticality and exactly $1/f$-noise (i.e. the critical exponent is equal to $-1$) and observe emergent phenomena of the same type self-organised criticality on the…

Statistical Mechanics · Physics 2022-04-26 Nikita Kalinin
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