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We present a dynamic data structure for maintaining the persistent homology of a time series of real numbers. The data structure supports local operations, including the insertion and deletion of an item and the cutting and concatenating of…

Data Structures and Algorithms · Computer Science 2024-07-03 Sebastiano Cultrera di Montesano , Herbert Edelsbrunner , Monika Henzinger , Lara Ost

In numerous fields, dynamic time series data require continuous updates, necessitating efficient data processing techniques for accurate analysis. This paper examines the banana tree data structure, specifically designed to efficiently…

Data Structures and Algorithms · Computer Science 2025-03-20 Lara Ost , Sebastiano Cultrera di Montesano , Herbert Edelsbrunner

We present a data structure that for a dynamic graph $G$ that is updated by edge insertions and deletions, maintains a tree decomposition of $G$ of width at most $6k+5$ under the promise that the treewidth of $G$ never grows above $k$. The…

Data Structures and Algorithms · Computer Science 2023-04-05 Tuukka Korhonen , Konrad Majewski , Wojciech Nadara , Michał Pilipczuk , Marek Sokołowski

We address the problem of building and maintaining distributed spanning trees in highly dynamic networks, in which topological events can occur at any time and any rate, and no stable periods can be assumed. In these harsh environments, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-07-23 Arnaud Casteigts , Serge Chaumette , Frédéric Guinand , Yoann Pigné

Using a set of $\Lambda$CDM simulations of cosmic structure formation, we study the evolving connectivity and changing topological structure of the cosmic web using state-of-the-art tools of multiscale topological data analysis (TDA). We…

We present a dynamic data structure that maintains a tree decomposition of width at most $9k+8$ of a dynamic graph with treewidth at most $k$, which is updated by edge insertions and deletions. The amortized update time of our data…

Data Structures and Algorithms · Computer Science 2025-04-14 Tuukka Korhonen

Dynamic graph theory is a novel, growing area that deals with graphs that change over time and is of great utility in modelling modern wireless, mobile and dynamic environments. As a graph evolves, possibly arbitrarily, it is challenging to…

Computational Complexity · Computer Science 2012-05-28 Bernard Mans , Luke Mathieson

We introduce top trees as a design of a new simpler interface for data structures maintaining information in a fully-dynamic forest. We demonstrate how easy and versatile they are to use on a host of different applications. For example, we…

Data Structures and Algorithms · Computer Science 2007-05-23 Stephen Alstrup , Jacob Holm , Kristian de Lichtenberg , Mikkel Thorup

Temporal graphs represent interactions between entities over time. Deciding whether entities can reach each other through temporal paths is useful for various applications such as in communication networks and epidemiology. Previous works…

Data Structures and Algorithms · Computer Science 2023-08-24 Luiz Fernando Afra Brito , Marcelo Keese Albertini , Bruno Augusto Nassif Travençolo , Gonzalo Navarro

Persistent homology analysis provides means to capture the connectivity structure of data sets in various dimensions. On the mathematical level, by defining a metric between the objects that persistence attaches to data sets, we can…

Machine Learning · Computer Science 2019-06-12 Henri Riihimäki , José Licón-Saláiz

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

SPQR-trees are a central component of graph drawing and are also important in many further areas of computer science. From their inception onwards, they have always had a strong relation to dynamic algorithms maintaining information, e.g.,…

Data Structures and Algorithms · Computer Science 2023-01-11 Simon D. Fink , Ignaz Rutter

Multiparameter persistence modules come up naturally in topological data analysis and topological robotics. Given a metric graph $(X,\delta)$, the second configuration space of $(X,\delta)$ with proximity parameters (for example, the…

Algebraic Topology · Mathematics 2023-10-10 Wenwen Li

This paper addresses the critical challenge of developing data-driven certificates for the stability and safety of unmodeled dynamical systems by leveraging a tree data structure and an upper bound of the system's Lipschitz constant.…

Systems and Control · Electrical Eng. & Systems 2025-11-25 Amy K. Strong , Ali Kashani , Claus Danielson , Leila J. Bridgeman

Data quality is crucial for the successful training, generalization and performance of machine learning models. We propose to measure the quality of a subset concerning the dataset it represents, using topological data analysis techniques.…

Algebraic Topology · Mathematics 2024-10-01 Álvaro Torras-Casas , Eduardo Paluzo-Hidalgo , Rocio Gonzalez-Diaz

Motivated by an application in computational topology, we consider a novel variant of the problem of efficiently maintaining dynamic rooted trees. This variant requires merging two paths in a single operation. In contrast to the standard…

Data Structures and Algorithms · Computer Science 2007-11-13 Loukas Georgiadis , Haim Kaplan , Nira Shafrir , Robert E. Tarjan , Renato F. Werneck

We present a new data structure for maintaining dynamic permutations, which we call a $\textit{forest of splay trees (FST)}$. The FST allows one to efficiently maintain the cycle structure of a permutation $\pi$ when the allowed updates are…

Data Structures and Algorithms · Computer Science 2023-06-08 Zsuzsanna Lipták , Francesco Masillo , Gonzalo Navarro

Temporal graphs represent interactions between entities over the time. These interactions may be direct (a contact between two nodes at some time instant), or indirect, through sequences of contacts called temporal paths (journeys).…

Data Structures and Algorithms · Computer Science 2021-04-01 Luiz F. Afra Brito , Marcelo Albertini , Arnaud Casteigts , Bruno A. N. Travençolo

Dynamic techniques are a scalable and effective way to analyze concurrent programs. Instead of analyzing all behaviors of a program, these techniques detect errors by focusing on a single program execution. Often a crucial step in these…

Logic in Computer Science · Computer Science 2025-09-16 Umang Mathur , Andreas Pavlogiannis , Hünkar Can Tunç , Mahesh Viswanathan

A topos theoretic generalisation of the category of sets allows for modelling spaces which vary according to time intervals. Persistent homology, or more generally, persistence is a central tool in topological data analysis, which examines…

Rings and Algebras · Mathematics 2015-06-23 João Pita Costa , Mikael Vejdemo Johansson , Primož Škraba
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