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Embedding networks into a fixed dimensional feature space, while preserving its essential structural properties is a fundamental task in graph analytics. These feature vectors (graph descriptors) are used to measure the pairwise similarity…

Databases · Computer Science 2020-02-20 Zohair Raza Hassan , Mudassir Shabbir , Imdadullah Khan , Waseem Abbas

Given a dynamic network, where edges appear and disappear over time, we are interested in finding sets of edges that have similar temporal behavior and form a dense subgraph. Formally, we define the problem as the enumeration of the maximal…

Social and Information Networks · Computer Science 2021-03-02 Giulia Preti , Polina Rozenshtein , Aristides Gionis , Yannis Velegrakis

Ontologies have been widely used in numerous and varied applications, e.g., to support data modeling, information integration, and knowledge management. With the increasing size of ontologies, ontology understanding, which is playing an…

Information Retrieval · Computer Science 2018-05-17 Seyedamin Pouriyeh , Mehdi Allahyari , Qingxia Liu , Gong Cheng , Hamid Reza Arabnia , Yuzhong Qu , Krys Kochut

Graph embedding is a transformation of nodes of a graph into a set of vectors. A~good embedding should capture the graph topology, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes. If these…

Social and Information Networks · Computer Science 2022-06-22 Arash Dehghan-Kooshkghazi , Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge

We propose a theoretical framework for training Graph Neural Networks (GNNs) on large input graphs via training on small, fixed-size sampled subgraphs. This framework is applicable to a wide range of models, including popular sampling-based…

Machine Learning · Computer Science 2023-10-18 Yeganeh Alimohammadi , Luana Ruiz , Amin Saberi

We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it. Most assembly algorithms utilize assembly graphs like the de Bruijn graph or the overlap…

Data Structures and Algorithms · Computer Science 2013-08-02 Taku Onodera , Kunihiko Sadakane , Tetsuo Shibuya

Characterizing large online social networks (OSNs) through node querying is a challenging task. OSNs often impose severe constraints on the query rate, hence limiting the sample size to a small fraction of the total network. Various ad-hoc…

Social and Information Networks · Computer Science 2013-11-14 Pinghui Wang , Bruno Ribeiro , Junzhou Zhao , John C. S. Lui , Don Towsley , Xiaohong Guan

Diagrams play a central role in research papers for conveying ideas, yet they are often notoriously complex and labor-intensive to create. Although diagrams are presented as images, standard image generative models struggle to produce clear…

Computation and Language · Computer Science 2025-11-03 Chumeng Liang , Jiaxuan You

Graphs are pervasive in the real-world, such as social network analysis, bioinformatics, and knowledge graphs. Graph neural networks (GNNs) have great ability in node classification, a fundamental task on graphs. Unfortunately, conventional…

Machine Learning · Computer Science 2024-09-05 Quan Li , Tianxiang Zhao , Lingwei Chen , Junjie Xu , Suhang Wang

We propose a concise representation of videos that encode perceptually meaningful features into graphs. With this representation, we aim to leverage the large amount of redundancies in videos and save computations. First, we construct…

Computer Vision and Pattern Recognition · Computer Science 2022-07-21 Eitan Kosman , Dotan Di Castro

The overview-driven visual analysis of large-scale dynamic graphs poses a major challenge. We propose Multiscale Snapshots, a visual analytics approach to analyze temporal summaries of dynamic graphs at multiple temporal scales. First, we…

Human-Computer Interaction · Computer Science 2020-09-17 Eren Cakmak , Udo Schlegel , Dominik Jäckle , Daniel Keim , Tobias Schreck

Graphs are a widely used paradigm for representing non-Euclidean data, with applications ranging from social network analysis to biomolecular prediction. While graph learning has achieved remarkable progress, real-world graph data presents…

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

Finding dense subgraphs in a graph is a fundamental graph mining task, with applications in several fields. Algorithms for identifying dense subgraphs are used in biology, in finance, in spam detection, etc. Standard formulations of this…

Data Structures and Algorithms · Computer Science 2018-07-10 G. Nikolentzos , P. Meladianos , Y. Stavrakas , M. Vazirgiannis

Vector data is prevalent across business and scientific applications, and its popularity is growing with the proliferation of learned embeddings. Vector data collections often reach billions of vectors with thousands of dimensions, thus,…

Information Retrieval · Computer Science 2025-09-08 Ilias Azizi , Karima Echihabi , Themis Palpanas

In many applications, it is necessary to retrieve pairs of vertices with the path between them satisfying certain constraints, since regular expression is a powerful tool to describe patterns of a sequence. To meet such requirements, in…

Databases · Computer Science 2019-04-29 Hongzhi Wang , Jiabao Han , Bin Shao , Jianzhong Li

We present an exact algorithm for computing all common subgraphs with the maximum number of vertices across multiple graphs. Our approach is further extended to handle the connected Maximum Common Subgraph (MCS), identifying the largest…

Data Structures and Algorithms · Computer Science 2025-04-03 Johannes B. S. Petersen , Akbar Davoodi , Thomas Gärtner , Marc Hellmuth , Daniel Merkle

In this paper, we present a novel way to summarize the structure of large graphs, based on non-parametric estimation of edge density in directed multigraphs. Following coclustering approach, we use a clustering of the vertices, with a…

Social and Information Networks · Computer Science 2015-08-07 Marc Boullé

Real data collected from different applications that have additional topological structures and connection information are amenable to be represented as a weighted graph. Considering the node labeling problem, Graph Neural Networks (GNNs)…

Social and Information Networks · Computer Science 2020-02-06 Xiaoxiao Li , Joao Saude

Sampling is a widely used graph reduction technique to accelerate graph computations and simplify graph visualizations. By comprehensively analyzing the literature on graph sampling, we assume that existing algorithms cannot effectively…

Social and Information Networks · Computer Science 2020-09-17 Ying Zhao , Haojin Jiang , Qi'an Chen , Yaqi Qin , Huixuan Xie , Yitao Wu Shixia Liu , Zhiguang Zhou , Jiazhi Xia , Fangfang Zhou