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We introduce a simplified technique for incorporating diffusive phenomena into lattice-gas molecular dynamics models. In this method, spatial interactions take place one dimension at a time, with a separate fractional timestep devoted to…

Cellular Automata and Lattice Gases · Physics 2007-05-23 Raissa M. D'Souza , Norman H. Margolus , Mark A. Smith

This study solves the output regulation problem for a reaction-diffusion system confronting concurrent input delay and fully unidentified disturbances (encompassing both unknown frequencies and amplitudes) across all channels. The principal…

Optimization and Control · Mathematics 2025-04-22 Shen Wang , Zhong-Jie Han , Kai Liu , Zhi-Xue Zhao

Rhythmic activity is ubiquitous in biological systems from the cellular to organism level. Reconstructing the instantaneous phase is the first step in analyzing the essential mechanism leading to a synchronization state from the observed…

Adaptation and Self-Organizing Systems · Physics 2022-09-02 Akari Matsuki , Hiroshi Kori , Ryota Kobayashi

We introduce here a simple finite-dimensional feedback control scheme for stabilizing solutions of infinite-dimensional dissipative evolution equations, such as reaction-diffusion systems, the Navier-Stokes equations and the…

Analysis of PDEs · Mathematics 2014-05-26 Abderrahim Azouani , Edriss S. Titi

Reaction-diffusion systems where transition rates exhibit quenched disorder are common in physical and chemical systems. We study pair reactions on a periodic two-dimensional lattice, including continuous deposition and spontaneous…

Disordered Systems and Neural Networks · Physics 2010-11-10 A. Wolff , I. Lohmar , J. Krug , Y. Frank , O. Biham

Reaction-diffusion systems offer a powerful framework for understanding self-organized patterns in biological systems, yet controlling these patterns remains a significant challenge. As a consequence, we present a rigorous framework of…

Optimization and Control · Mathematics 2026-04-13 Mohamed Amine Ouchdiri , Hamza Faquir , Saad Benjelloun , Mohamed Adlene Maghenem , Irene Otero-Muras , Adnane Saoud

We propose a method to analytically show the possibility for the appearance of a maximum in the signal-to-noise ratio in nonpotential systems. We apply our results to the FitzHugh-Nagumo model under a periodic external forcing, showing that…

Condensed Matter · Physics 2009-10-31 T. Alarcon , A. Perez-Madrid , J. M. Rubi

Reaction-diffusion models have been used over decades to study biological systems. In this context, evolution equations for probability distribution functions and the associated stochastic differential equations have nowadays become…

Statistical Mechanics · Physics 2018-10-09 C. Escudero , S. B. Yuste , E. Abad , F. Le Vot

We present the spatial regime conversion method (SRCM), a novel hybrid modelling framework for simulating reaction-diffusion systems that adaptively combines stochastic discrete and deterministic continuum representations. Extending the…

Quantitative Methods · Quantitative Biology 2025-07-08 Charles G. Cameron , Cameron A. Smith , Christian A. Yates

An approach is presented for coupled chaotic systems, estimating an inferior bound value for the absolute phase difference, in order to say that phase synchronization is present. This approach shows that synchronicity in phase implies…

Classical Physics · Physics 2007-06-22 M. S. Baptista , T. Pereira , J. Kurths

Rotating spiral waves are a form of self-organization observed in spatially extended systems of physical, chemical, and biological nature. A small perturbation causes gradual change in spatial location of spiral's rotation center and…

Pattern Formation and Solitons · Physics 2015-05-13 I. V. Biktasheva , D. Barkley , V. N. Biktashev , G. V. Bordyugov , A. J. Foulkes

We theoretically investigate collective phase synchronization between interacting groups of globally coupled noisy identical phase oscillators exhibiting macroscopic rhythms. Using the phase reduction method, we derive coupled collective…

Adaptation and Self-Organizing Systems · Physics 2010-11-12 Yoji Kawamura , Hiroya Nakao , Kensuke Arai , Hiroshi Kori , Yoshiki Kuramoto

We introduce a simple model system to study synchronization theoretically in quantum oscillators that are not just in limit-cycle states, but rather display a more complex bistable dynamics. Our oscillator model is purely dissipative, with…

Quantum Physics · Physics 2020-03-04 Matthew R. Jessop , Weibin Li , Andrew D. Armour

The phase-space of a simple synchronization model is thoroughly investigated. The model considers two-mode stochastic oscillators, coupled through a pulse-like interaction controlled by simple optimization rules. A complex phase space is…

Adaptation and Self-Organizing Systems · Physics 2020-12-03 Szabolcs Horvát , Zoltán Néda

A general system of particles (of one or several species) on a one dimensional lattice with boundaries is considered. Two general behaviors of such systems are investigated. The stationary behavior of the system, and the dominant way of the…

Statistical Mechanics · Physics 2015-06-24 Mohammad Khorrami , Amir Aghamohammadi

We study the dynamics of the quantum phase distribution associated with the reduced density matrix of a system for a number of situations of practical importance, as the system evolves under the influence of its environment, interacting via…

Quantum Physics · Physics 2009-11-13 Subhashish Banerjee , R. Srikanth

Stochastic simulation methods can be applied successfully to model exact spatio-temporally resolved reaction-diffusion systems. However, in many cases, these methods can quickly become extremely computationally intensive with increasing…

Quantitative Methods · Quantitative Biology 2016-04-29 Jonathan U. Harrison , Christian A. Yates

We consider a spatially extended mesoscopic FitzHugh-Nagumo model with strong local interactions and prove that its asymptotic limit converges towards the classical nonlocal reaction-diffusion FitzHugh-Nagumo system. As the local…

Analysis of PDEs · Mathematics 2022-08-31 Alain Blaustein , Francis Filbet

In two-dimensional reaction-diffusion systems, local curvature perturbations in the shape of traveling waves are typically damped out and disappear in the course of time. If, however, the inhibitor diffuses much faster than the activator,…

Pattern Formation and Solitons · Physics 2015-01-16 Sonja Molnos , Jakob Löber , Jan Frederik Totz , Harald Engel

A one-dimensional model on a line of the length L is investigated, which involves particle diffusion as well as single particle annihilation. There are also creation and annihilation at the boundaries. The static and dynamical behaviors of…

Mathematical Physics · Physics 2014-03-17 Mohammad Khorrami , Amir Aghamohammadi
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