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The TREE method has been widely used for long-range interaction {\it N}-body problems. We have developed a parallel TREE code for two-component classical plasmas with open boundary conditions and highly non-uniform charge distributions. The…

Computational Physics · Physics 2009-05-04 Byoungseon Jeon , Joel D. Kress , Lee A. Collins , Niels Grønbech-Jensen

Recent advances in localized implicit functions have enabled neural implicit representation to be scalable to large scenes. However, the regular subdivision of 3D space employed by these approaches fails to take into account the sparsity of…

Graphics · Computer Science 2021-11-02 Jia-Heng Tang , Weikai Chen , Jie Yang , Bo Wang , Songrun Liu , Bo Yang , Lin Gao

Motivated by questions in social networks, distributed computing and probabilistic combinatorics, the last few years have seen increasing interest in network evolution models where new vertices entering the system need to make decisions…

Probability · Mathematics 2025-10-22 Omer Angel , Shankar Bhamidi , Serte Donderwinkel , Neeladri Maitra , Akshay Sakanaveeti

In a recurrent setting, conventional approaches to neural architecture search find and fix a general model for all data samples and time steps. We propose a novel algorithm that can dynamically search for the structure of cells in a…

Machine Learning · Computer Science 2019-05-28 Xin Qian , Matthew Kennedy , Diego Klabjan

The multi-level hp-refinement scheme is a powerful extension of the finite element method that allows local mesh adaptation without the trouble of constraining hanging nodes. This is achieved through hierarchical high-order overlay meshes,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-05 John N. Jomo , Nils Zander , Mohamed Elhaddad , Ali Özcan , Stefan Kollmannsberger , Ralf-Peter Mundani , Ernst Rank

Enumeration algorithms have been one of recent hot topics in theoretical computer science. Different from other problems, enumeration has many interesting aspects, such as the computation time can be shorter than the total output size, by…

Data Structures and Algorithms · Computer Science 2014-07-16 Takeaki Uno

This paper presents a detailed comparison of a recently proposed algorithm for optimizing decision trees, tree alternating optimization (TAO), with other popular, established algorithms. We compare their performance on a number of…

Machine Learning · Computer Science 2020-03-23 Arman Zharmagambetov , Suryabhan Singh Hada , Miguel Á. Carreira-Perpiñán , Magzhan Gabidolla

An evolutionary tree (phylogenetic tree) is a binary, rooted, unordered tree that models the evolutionary history of currently living species in which leaves are labeled by species. In this paper, we investigate the problem of finding the…

Populations and Evolution · Quantitative Biology 2013-04-02 Soheil Jahangiri Tazehkand , Seyed Naser Hashemi , Hadi Poormohammadi

We give a greedy learning algorithm for reconstructing an evolutionary tree based on a certain harmonic average on triplets of terminal taxa. After the pairwise distances between terminal taxa are estimated from sequence data, the algorithm…

Data Structures and Algorithms · Computer Science 2007-05-23 Miklos Csuros , Ming-Yang Kao

We present a study of several generic tree search techniques applied to the Sequential Ordering Problem. This study enables us to propose a simple and competitive tree search algorithm. It consists of an iterative Beam Search algorithm that…

Discrete Mathematics · Computer Science 2020-01-26 Luc Libralesso , Abdel-Malik Bouhassoun , Hadrien Cambazard , Vincent Jost

Mechanical exfoliation of graphene and its identification by optical inspection is one of the milestones in condensed matter physics that sparked the field of 2D materials. Finding regions of interest from the entire sample space and…

Materials Science · Physics 2022-09-19 Woon Hyung Cho , Jiseon Shin , Young Duck Kim , George J. Jung

We adopt data structure in the form of cover trees and iteratively apply approximate nearest neighbour (ANN) searches for fast compressed sensing reconstruction of signals living on discrete smooth manifolds. Levering on the recent…

Machine Learning · Statistics 2018-09-13 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike E. Davies

Given a set $P$ of terminals in the plane and a partition of $P$ into $k$ subsets $P_1, ..., P_k$, a two-level rectilinear Steiner tree consists of a rectilinear Steiner tree $T_i$ connecting the terminals in each set $P_i$ ($i=1,...,k$)…

Computational Geometry · Computer Science 2015-04-13 Stephan Held , Nicolas Kämmerling

We investigate the exploitation of both lexical and neural relevance signals for ad-hoc passage retrieval. Our exploration involves a large-scale training dataset in which dense neural representations of MS-MARCO queries and passages are…

Information Retrieval · Computer Science 2025-10-21 Franco Maria Nardini , Raffaele Perego , Nicola Tonellotto , Salvatore Trani

Information retrieval is a core component of many intelligent systems as it enables conditioning of outputs on new and large-scale datasets. While effective, the standard practice of encoding data into high-dimensional representations for…

Information Retrieval · Computer Science 2026-02-16 Shubham Gupta , Zichao Li , Tianyi Chen , Cem Subakan , Siva Reddy , Perouz Taslakian , Valentina Zantedeschi

Decision tree learning is a widely used approach in machine learning, favoured in applications that require concise and interpretable models. Heuristic methods are traditionally used to quickly produce models with reasonably high accuracy.…

Identifying intersections among a set of d-dimensional rectangular regions (d-rectangles) is a common problem in many simulation and modeling applications. Since algorithms for computing intersections over a large number of regions can be…

Data Structures and Algorithms · Computer Science 2016-05-18 Moreno Marzolla , Gabriele D'Angelo , Marco Mandrioli

We describe mts, which is a generic framework for parallelizing certain types of tree search programs, that (a) provides a single common wrapper containing all of the parallelization, and (b) minimizes the changes needed to the existing…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-26 David Avis , Charles Jordan

Despite the latest prevailing success of deep neural networks (DNNs), several concerns have been raised against their usage, including the lack of intepretability the gap between DNNs and other well-established machine learning models, and…

Machine Learning · Computer Science 2021-01-01 Jianghao Shen , Sicheng Wang , Zhangyang Wang

Transformer layers, which use an alternating pattern of multi-head attention and multi-layer perceptron (MLP) layers, provide an effective tool for a variety of machine learning problems. As the transformer layers use residual connections…

Machine Learning · Computer Science 2022-12-13 Yaofeng Desmond Zhong , Tongtao Zhang , Amit Chakraborty , Biswadip Dey