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In this paper, we study the graph classification problem from the graph homomorphism perspective. We consider the homomorphisms from $F$ to $G$, where $G$ is a graph of interest (e.g. molecules or social networks) and $F$ belongs to some…

Machine Learning · Computer Science 2020-07-03 Hoang NT , Takanori Maehara

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

Graph transformations definable in logic can be described using the notion of transductions. By understanding transductions as a basic embedding mechanism, which captures the possibility of encoding one graph in another graph by means of…

Combinatorics · Mathematics 2025-01-09 Michał Pilipczuk

Recently, so-called treebased phylogenetic networks have gained considerable interest in the literature, where a treebased network is a network that can be constructed from a phylogenetic tree, called the base tree, by adding additional…

Populations and Evolution · Quantitative Biology 2019-11-28 Mareike Fischer , Michelle Galla , Lina Herbst , Yangjing Long , Kristina Wicke

A directed graph $D$ is singly connected if for every ordered pair of vertices $(s,t)$, there is at most one path from $s$ to $t$ in $D$. Graph orientation problems ask, given an undirected graph $G$, to find an orientation of the edges…

Combinatorics · Mathematics 2023-06-06 Tim A. Hartmann , Komal Muluk

Graph-structured data consisting of objects (i.e., nodes) and relationships among objects (i.e., edges) are ubiquitous. Graph-level learning is a matter of studying a collection of graphs instead of a single graph. Traditional graph-level…

Machine Learning · Computer Science 2022-06-01 Ge Zhang , Jia Wu , Jian Yang , Shan Xue , Wenbin Hu , Chuan Zhou , Hao Peng , Quan Z. Sheng , Charu Aggarwal

A cyclic base ordering of a connected graph $G$, is a cyclic ordering of $E(G)$ such that every cyclically consecutive $|V(G)|-1$ edges form a spanning tree. In this project, we study cyclic base ordering of various families of graphs,…

Combinatorics · Mathematics 2021-10-05 Jessica Li , Eric Yang , William Zhang

The \emph{distance-number} of a graph $G$ is the minimum number of distinct edge-lengths over all straight-line drawings of $G$ in the plane. This definition generalises many well-known concepts in combinatorial geometry. We consider the…

Combinatorics · Mathematics 2008-09-09 Paz Carmi , Vida Dujmović , Pat Morin , David R. Wood

In this chapter (Chapter V) we present several results which demonstrate a close connection and useful exchange of ideas between graph theory and knot theory. These disciplines were shown to be related from the time of Tait (if not Listing)…

Geometric Topology · Mathematics 2007-05-23 Jozef H. Przytycki

Great part of the interest in complex networks has been motivated by the presence of structured, frequently non-uniform, connectivity. Because diverse connectivity patterns tend to result in distinct network dynamics, and also because they…

Disordered Systems and Neural Networks · Physics 2009-11-13 Paulino R. Villas Boas , Francisco A. Rodrigues , Gonzalo Travieso , Luciano da F. Costa

The sigma index in graph theory refers to a measure of the degree differences between vertices in a graph. The goal is to determine the graphs that have the maximum sigma index within certain classes of graphs. Abdo, Dimitrov, and Gutman…

General Mathematics · Mathematics 2024-05-10 Jasem Hamoud , Artem Kurnosov

A network can be analyzed at different topological scales, ranging from single nodes to motifs, communities, up to the complete structure. We propose a novel intermediate-level topological analysis that considers non-overlapping subgraphs…

Computational Physics · Physics 2009-11-13 Lucas Antiqueira , Luciano da Fontoura Costa

In this paper we introduce the graph $\Gamma_{sc}(G)$ associated with a group $G$, called the solvable conjugacy class graph (abbreviated as SCC-graph), whose vertices are the nontrivial conjugacy classes of $G$ and two distinct conjugacy…

Combinatorics · Mathematics 2022-02-08 Parthajit Bhowal , Peter J. Cameron , Rajat Kanti Nath , Benjamin Sambale

Many systems comprising entities in interactions can be represented as graphs, whose structure gives significant insights about how these systems work. Network theory has undergone further developments, in particular in relation to…

Data Analysis, Statistics and Probability · Physics 2016-06-14 Ronan Hamon , Pierre Borgnat , Patrick Flandrin , Céline Robardet

A graph $G$ is said to be a `set graph' if it admits an acyclic orientation that is also `extensional', in the sense that the out-neighborhoods of its vertices are pairwise distinct. Equivalently, a set graph is the underlying graph of the…

Discrete Mathematics · Computer Science 2015-03-20 Martin Milanič , Romeo Rizzi , Alexandru I. Tomescu

A vertex ranking of a graph is an assignment of ranks (or colors) to the vertices of the graph, in such a way that any simple path connecting two vertices of equal rank, must contain a vertex of a higher rank. In this paper we study a…

Combinatorics · Mathematics 2016-09-21 Ilan Karpas , Ofer Neiman , Shakhar Smorodinsky

A signed graph is a graph together with an assignment of signs to the edges. A closed walk in a signed graph is said to be positive (negative) if it has an even (odd) number of negative edges, counting repetition. Recognizing the signs of…

Combinatorics · Mathematics 2021-06-16 Reza Naserasr , Eric Sopena , Thomas Zaslavsky

In a graph, a watchman's walk is a minimum closed dominating walk. Given a graph $G$ and a single watchman, the length of a watchman's walk in $G$ (the watchman number) is denoted by $w(G)$ and the typical goals of the watchman's walk…

Combinatorics · Mathematics 2020-07-29 Danny Dyer , Jared Howell , Brittany Pittman

Link prediction in complex networks has attracted considerable attention from interdisciplinary research communities, due to its ubiquitous applications in biological networks, social networks, transportation networks, telecommunication…

Social and Information Networks · Computer Science 2020-12-22 Ece C. Mutlu , Toktam A. Oghaz , Amirarsalan Rajabi , Ivan Garibay

We investigate string graphs through the lens of graph product structure theory, which describes complicated graphs as subgraphs of strong products of simpler building blocks. A graph $G$ is called a string graph if its vertices can be…

Combinatorics · Mathematics 2025-11-20 Nikolai Karol
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