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Gene regulatory networks can be successfully modeled as Boolean networks. A much discussed hypothesis says that such model networks reproduce empirical findings the best if they are tuned to operate at criticality, i.e. at the borderline…

Molecular Networks · Quantitative Biology 2016-10-12 Pablo Villegas , José Ruiz-Franco , Jorge Hidalgo , Miguel A. Muñoz

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

Combinatorics · Mathematics 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher

The branching process is the minimal model for propagation dynamics, avalanches and criticality, broadly used in neuroscience. A simple extension of it, adding inhibitory nodes, induces a much-richer phenomenology, including, an…

Statistical Mechanics · Physics 2022-07-08 Roberto Corral López , Victor Buendía , Miguel A. Muñoz

When viewed at a certain coarse grain, the brain seems a relatively small dynamical system composed by a few dozen interacting areas, performing a number of stereotypical behaviors. It is known that, even relatively small dynamical systems…

Neurons and Cognition · Quantitative Biology 2015-06-26 Dante R. Chialvo

We investigate states of enhanced activity in a biological neuronal network composed of pulse-coupled oscillators. The synaptic couplings between the neurons are dynamic, modeling spike time dependent plasticity. The network exhibits…

Disordered Systems and Neural Networks · Physics 2012-08-17 Daniel Ritterskamp , Rudolf Friedrich

Highly correlated brain dynamics produces synchronized states with no behavioral value, while weakly correlated dynamics prevent information flow. In between these states, the unique dynamical features of the critical state endow the brain…

Neurons and Cognition · Quantitative Biology 2012-10-16 Dante R. Chialvo

The research concerns the dynamics of complex autonomous Kauffman networks. The article defines and shows using simulation experiments half-chaotic networks, which exhibit features much more similar to typically modeled systems like a…

Adaptation and Self-Organizing Systems · Physics 2022-01-14 Andrzej Gecow

We systematically investigate the intricate interplay between short-range fermion-fermion interactions and disorder scatterings beneath the superconducting dome of noncentrosymmetric nodal-line superconductors. Employing the renormalization…

Superconductivity · Physics 2024-07-17 Wen-Hao Bian , Jing Wang

Cortical network functioning critically depends on finely tuned interactions to afford neuronal activity propagation over long distances while avoiding runaway excitation. This importance is highlighted by the pathological consequences and…

Neurons and Cognition · Quantitative Biology 2022-10-12 Christian Meisel

We study patterns of partial synchronization in a network of FitzHugh-Nagumo oscillators with empirical structural connectivity measured in human subjects. We report the spontaneous occurrence of synchronization phenomena that closely…

Adaptation and Self-Organizing Systems · Physics 2021-02-03 M. Gerster , R. Berner , J. Sawicki , A. Zakharova , A. Škoch , J. Hlinka , K. Lehnertz , E. Schöll

Criticality is hypothesized as a physical mechanism underlying efficient transitions between cortical states and remarkable information processing capacities in the brain. While considerable evidence generally supports this hypothesis,…

Neurons and Cognition · Quantitative Biology 2023-06-12 Yang Tian , Zeren Tan , Hedong Hou , Guoqi Li , Aohua Cheng , Yike Qiu , Kangyu Weng , Chun Chen , Pei Sun

Many social, biological, and economic systems can be approached by complex networks of interacting units. The behaviour of several models on small-world networks has recently been studied. These models are expected to capture the essential…

Statistical Mechanics · Physics 2009-11-07 Alejandro D. Sanchez , Juan M. Lopez , Miguel A. Rodriguez

The cerebral cortex spontaneously displays different patterns of activity that evolve over time according to the brain state. Sleep, wakefulness, resting states, and attention are examples of a wide spectrum of physiological states that can…

Networks of coupled neural systems represent an important class of models in computational neuroscience. In some applications it is required that equilibrium points in these networks remain stable under parameter variations. Here we present…

Disordered Systems and Neural Networks · Physics 2007-05-23 Wilson A. Truccolo , Govindan Rangarajan , Yonghong Chen , Mingzhou Ding

Brain networks are typically represented by adjacency matrices, where each node corresponds to a brain region. In traditional brain network analysis, nodes are assumed to be matched across individuals, but the methods used for node matching…

Methodology · Statistics 2025-03-21 Martin Cole , Yang Xiang , Will Consagra , Anuj Srivastava , Xing Qiu , Zhengwu Zhang

We consider an idealized network, formed by N neurons individually described by the FitzHugh-Nagumo equations and connected by electrical synapses. The limit for N to infinity of the resulting discrete model is thoroughly investigated, with…

Neurons and Cognition · Quantitative Biology 2013-07-11 Claudio Canuto , Anna Cattani

The ability to effectively control brain dynamics holds great promise for the enhancement of cognitive function in humans, and the betterment of their quality of life. Yet, successfully controlling dynamics in neural systems is challenging,…

Quantitative Methods · Quantitative Biology 2018-08-29 Evelyn Tang , Danielle S. Bassett

Networks of randomly connected neurons are among the most popular models in theoretical neuroscience. The connectivity between neurons in the cortex is however not fully random, the simplest and most prominent deviation from randomness…

Neurons and Cognition · Quantitative Biology 2018-07-09 Daniel Martí , Nicolas Brunel , Srdjan Ostojic

Full scale simulations of neuronal network models of the brain are challenging due to the high density of connections between neurons. This contribution reports run times shorter than the simulated span of biological time for a full scale…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-04 Anno C. Kurth , Johanna Senk , Dennis Terhorst , Justin Finnerty , Markus Diesmann

The dynamical organization in the presence of noise of a Boolean neural network with random connections is analyzed. For low levels of noise, the system reaches a stationary state in which the majority of its elements acquire the same…

Disordered Systems and Neural Networks · Physics 2007-05-23 Cristian Huepe , Maximino Aldana