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The collection of branches (maximal linearly ordered sets of nodes) of the tree ${}^{<\omega}\omega$ (ordered by inclusion) forms an almost disjoint family (of sets of nodes). This family is not maximal -- for example, any level of the tree…

Logic · Mathematics 2009-09-25 Thomas E. Leathrum

This paper is centered on covariant dynamics on unimodular random graphs and random networks, namely maps from the set of vertices to itself which are preserved by graph or network isomorphisms. Such dynamics are referred to as…

Probability · Mathematics 2020-01-10 François Baccelli , Mir-Omid Haji-Mirsadeghi , Ali Khezeli

Consider the $d$ dimensional lattice $\mathbb{Z}^d$ where each vertex is open or closed with probability $p$ or $1-p$ respectively. An open vertex $\mathbb{u} := (\mathbb{u}(1), \mathbb{u}(2),...,\mathbb{u}(d))$ is connected by an edge to…

Probability · Mathematics 2015-02-27 Rahul Roy , Kumarjit Saha , Anish Sarkar

Given a Galton-Watson process conditioned to have total progeny equal to $n$, we study the asymptotic probability that this conditioned Galton-Watson process has distance to the border bigger or equal than $k$, as the number of nodes $n…

Probability · Mathematics 2025-03-05 Víctor J. Maciá

We study the statistics of edges and vertices in the vicinity of a reference vertex (origin) within random planar quadrangulations and Eulerian triangulations. Exact generating functions are obtained for theses graphs with fixed numbers of…

Statistical Mechanics · Physics 2010-04-05 J. Bouttier , P. Di Francesco , E. Guitter

It is known that many networks modeling real-life complex systems are small-word (large local clustering and small diameter) and scale-free (power law of the degree distribution), and very often they are also hierarchical. Although most of…

Combinatorics · Mathematics 2016-08-09 C. Dalfó , M. A. Fiol

Phylogenetic networks are a generalization of phylogenetic trees that are used to represent non-tree-like evolutionary histories that arise in organisms such as plants and bacteria, or uncertainty in evolutionary histories. An…

Populations and Evolution · Quantitative Biology 2017-12-08 Andrew Francis , Katharina Huber , Vincent Moulton

Dissimilarity measures for (possibly weighted) phylogenetic trees based on the comparison of their vectors of path lengths between pairs of taxa, have been present in the systematics literature since the early seventies. But, as far as…

Populations and Evolution · Quantitative Biology 2008-07-06 Gabriel Cardona , Merce Llabres , Francesc Rossello , Gabriel Valiente

Tree rotations (left and right) are basic local deformations allowing to transform between two unlabeled binary trees of the same size. Hence, there is a natural problem of practically finding such transformation path with low number of…

Data Structures and Algorithms · Computer Science 2016-10-20 Jarek Duda

Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of non-treelike evolutionary events, like recombination, hybridization, or lateral gene transfer. In this paper, we present and study a new…

Populations and Evolution · Quantitative Biology 2007-08-28 Gabriel Cardona , Francesc Rossello , Gabriel Valiente

We consider the rooted trees which not have isomorphic representation and introduce a conception of complexity a natural number also. The connection between quantity such trees with $n$ edges and a complexity of natural number $n$ is…

Combinatorics · Mathematics 2012-05-03 B. S. Kochkarev

A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…

Populations and Evolution · Quantitative Biology 2020-02-12 Samaneh Yourdkhani , John A. Rhodes

A vertex subset of a graph is called a distance-$k$ independent set if the distance between any two of its distinct vertices is at least $k + 1$. For all $n,k \geq 1$, we determine the minimum possible number of inclusion-wise maximal…

Combinatorics · Mathematics 2026-05-01 Dmitrii Taletskii

In this paper we at first consider plane trees with the root vertex and a marked directed edge, outgoing from the root vertex. For such trees we introduce a new characteristic --- the \emph{parity}, using the bracket code. It turns out that…

Combinatorics · Mathematics 2018-11-27 Irina Busjatskaja , Yury Kochetkov

We establish maximal trees and graphs for the difference of average distance and proximity proving thus the corresponding conjecture posed in [4]. We also establish maximal trees for the difference of average eccentricity and remoteness and…

Combinatorics · Mathematics 2020-10-22 Jelena Sedlar

Consider a vertex-reinforced jump process defined on a regular tree, where each vertex has exactly $b$ children, with $b \ge 3$. We prove the strong law of large numbers and the central limit theorem for the distance of the process from the…

Probability · Mathematics 2009-07-29 Andrea Collevecchio

Rooted phylogenetic networks provide a more complete representation of the ancestral relationship between species than phylogenetic trees when reticulate evolutionary processes are at play. One way to reconstruct a phylogenetic network is…

Combinatorics · Mathematics 2020-12-02 Allan Bai , Peter Erdos , Charles Semple , Mike Steel

Following Poupard's study of strictly ordered binary trees with respect to two parameters, namely, "end of minimal chain" and "parent of maximum leaf" a true Tree Calculus is being developed to solve a partial difference equation system and…

Combinatorics · Mathematics 2013-04-10 Dominique Foata , Guo-Niu Han

In this paper we study the adjacency spectrum of families of finite rooted trees with regular branching properties. In particular, we show that in the case of constant branching, the eigenvalues are realized as the roots of a family of…

Representation Theory · Mathematics 2020-03-31 Daryl R. DeFord , Daniel N. Rockmore

We study the random Fibonacci tree, which is an infinite binary tree with non-negative integers at each node. The root consists of the number 1 with a single child, also the number 1. We define the tree recursively in the following way: if…

Number Theory · Mathematics 2018-03-02 Kevin G. Hare , J. C. Saunders