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The consensus that complexity begets stability in ecosystems was challenged in the seventies, a result recently extended to ecologically-inspired networks. The approaches assume the existence of a feasible equilibrium, i.e. with positive…
We show that, in contrast to classical random graph models, many real-world complex systems -- including a variety of biological regulatory networks and technological networks such as the internet -- spontaneously self-organize to a richly…
The self-protection of alliances against external invaders is a key concept behind the maintenance of biodiversity in the face of natural selection. But since these alliances, which can be formed by different numbers of competitors, can…
Microbial ecosystems exhibit a surprising amount of functionally relevant diversity at all levels of taxonomic resolution, presenting a significant challenge for most modeling frameworks. A long-standing hope of theoretical ecology is that…
Scale-free foraging patterns are widespread among animals. These may be the outcome of an optimal searching strategy to find scarce randomly distributed resources, but a less explored alternative is that this behaviour may result from the…
Ecological communities with many species can be classified into dynamical phases. In systems with all-to-all interactions, a phase where a fixed point is always reached and a dynamically-fluctuating phase have been found. The dynamics when…
We perform a full similarity analysis of an idealized ecosystem using Buckingham's $\Pi$ theorem to obtain dimensionless similarity parameters given that some (non- unique) method exists that can differentiate different functional groups of…
Local coexistence of species in large ecosystems is traditionally explained within the broad framework of niche theory. However, its rationale hardly justifies rich biodiversity observed in nearly homogeneous environments. Here we consider…
In drylands, water availability determines plant population densities and whether they cooperate via facilitation or compete. When water scarcity intensifies, plant densities decrease and competition for water surpasses the benefits of soil…
The assembly of ecological communities from a pool of species is central to ecology, but the effect of this process on properties of community interaction networks is still largely unknown. Here, we use a systematic analytical framework to…
If one isolated species (corporation) is supposed to evolve following the logistic mapping, then we are tempted to think that the dynamics of two species (corporations) can be expressed by a coupled system of two discrete logistic…
Spatial separation is often included in models of ethnic divergence but it has also been realised that urban subcultures can, and frequently do, emerge in sympatry. Previous research tended to attribute this phenomenon to the human tendency…
Nested structure, which is non-random, controls cooperation dynamics and biodiversity in plant-animal mutualistic networks. This structural pattern has been explained in a static (non-growth) network models. However, evolutionary processes…
Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical model for the evolution of an idealized chemical system to study how a network of…
A theory of relative species abundance on sparsely-connected networks is presented by investigating the replicator dynamics with symmetric interactions. Sparseness of a network involves difficulty in analyzing the fixed points of the…
A wide variety of complex networks (social, biological, information etc.) exhibit local clustering with substantial variation in the clustering coefficient (the probability of neighbors being connected). Existing models of large graphs…
Collective organization in physical, biophysical, and biological systems often emerges from many weak, local interactions, yet the resulting global structures display striking regularities and apparent limits in diversity. Existing…
Many natural and social science systems are described using probability distributions over elements that are related to each other: for instance, occupations with shared skills or species with similar traits. Standard information theory…
Precisely how ecological factors influence animal social structure is far from clear. We explore this question using an agent-based model inspired by the fission-fusion society of Spider monkeys (Ateles spp). Our model introduces a…
Social networks are organized into communities with dense internal connections, giving rise to high values of the clustering coefficient. In addition, these networks have been observed to be assortative, i.e. highly connected vertices tend…