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We introduce a general model for the local obfuscation of probability distributions by probabilistic perturbation, e.g., by adding differentially private noise, and investigate its theoretical properties. Specifically, we relax a notion of…

Cryptography and Security · Computer Science 2023-07-19 Yusuke Kawamoto , Takao Murakami

In this paper, we consider recommender systems with side information in the form of graphs. Existing collaborative filtering algorithms mainly utilize only immediate neighborhood information and have a hard time taking advantage of deeper…

Machine Learning · Computer Science 2019-05-30 Liwei Wu , Hsiang-Fu Yu , Nikhil Rao , James Sharpnack , Cho-Jui Hsieh

DNA sequencing to identify genetic variants is becoming increasingly valuable in clinical settings. Assessment of variants in such sequencing data is commonly implemented through Bayesian heuristic algorithms. Machine learning has shown…

In this work, an eavesdropping-aware routing and spectrum allocation approach is proposed utilizing network coding (NC) in elastic optical networks (EONs). To provide physical layer security in EONs and secure the confidential connections…

Networking and Internet Architecture · Computer Science 2022-11-04 Giannis Savva , Konstantinos Manousakis , Georgios Ellinas

The projected increase of genotyping in the clinic and the rise of large genomic databases has led to the possibility of using patient medical data to perform genomewide association studies (GWAS) on a larger scale and at a lower cost than…

Quantitative Methods · Quantitative Biology 2016-04-18 Sean Simmons , Cenk Sahinalp , Bonnie Berger

Camouflaging data by generating fake information is a well-known obfuscation technique for protecting data privacy. In this paper, we focus on a very sensitive and increasingly exposed type of data: location data. There are two main…

Cryptography and Security · Computer Science 2015-05-29 Vincent Bindschaedler , Reza Shokri

Training GANs under limited data often leads to discriminator overfitting and memorization issues, causing divergent training. Existing approaches mitigate the overfitting by employing data augmentations, model regularization, or attention…

Computer Vision and Pattern Recognition · Computer Science 2022-10-12 Mengping Yang , Zhe Wang , Ziqiu Chi , Yanbing Zhang

Classical correlation can be locked via quantum means--quantum data locking. With a short secret key, one can lock an exponentially large amount of information, in order to make it inaccessible to unauthorized users without the key. Quantum…

In order to prevent leaking input information from intermediate-layer features, this paper proposes a method to revise the traditional neural network into the rotation-equivariant neural network (RENN). Compared to the traditional neural…

Machine Learning · Computer Science 2020-06-25 Hao Zhang , Yiting Chen , Haotian Ma , Xu Cheng , Qihan Ren , Liyao Xiang , Jie Shi , Quanshi Zhang

Although the bulk of the research in privacy and statistical disclosure control is designed for cross-sectional data, i.e. data where individuals are observed at one single point in time, longitudinal data, i.e. individuals observed over…

Methodology · Statistics 2025-08-15 Nicolas Ruiz

Although theories regarding the role of sequence-specific DNA resonance in biology have abounded for over 40 years, the published evidence for it is lacking. Here, the authors reasoned that for sustained resonance signaling, the number of…

Other Quantitative Biology · Quantitative Biology 2019-10-28 Ivan Savelev , Max Myakishev-Rempel

While achieving a compression ratio of 2.0 bits/base, the new algorithm codes non-N bases in fixed length. It dramatically reduces the time of coding and decoding than previous DNA compression algorithms and some universal compression…

Information Theory · Computer Science 2007-07-16 Jie Liu , Sheng Bao , Zhiqiang Jing , Shi Chen

To increase the information capacity of DNA storage, composite DNA letters were introduced. We propose a novel channel model for composite DNA in which composite sequences are decomposed into ordered standard non-composite sequences. The…

Information Theory · Computer Science 2025-10-31 Besart Dollma , Ohad Elishco , Eitan Yaakobi

In a distributed information application an encoder compresses an arbitrary vector while a similar reference vector is available to the decoder as side information. For the Hamming-distance similarity measure, and when guaranteed perfect…

Information Theory · Computer Science 2020-09-08 Yuval Cassuto , Jacob Ziv

The origin and organizing principles of the genetic code remain fundamental puzzles in life science. The vanishingly low probability of the natural codon-to-amino acid mapping arising by chance has spurred the hypothesis that its structure…

Other Quantitative Biology · Quantitative Biology 2025-10-14 Yudam Seo , Tsvi Tlusty , Junghyo Jo

How robust is the natural genetic code with respect to mistranslation errors? It has long been known that the genetic code is very efficient in limiting the effect of point mutation. A misread codon will commonly code either for the same…

Biological Physics · Physics 2009-11-03 Dimitri Gilis , Serge Massar , Nicolas Cerf , Marianne Rooman

While measurement advances now allow extensive surveys of gene activity (large numbers of genes across many samples), interpretation of these data is often confounded by noise -- expression counts can differ strongly across samples due to…

Publishing person-specific transactions in an anonymous form is increasingly required by organizations. Recent approaches ensure that potentially identifying information (e.g., a set of diagnosis codes) cannot be used to link published…

Databases · Computer Science 2010-01-26 Grigorios Loukides , Aris Gkoulalas-Divanis , Bradley Malin

Splitting a literal genomic sequence into 4 binary files is enough to ensure confidentiality and integrity during storage and transfer of information. The binary files are resources for RSA or one-time-pad (OTP) cryptography protocols. It…

Cryptography and Security · Computer Science 2020-03-13 Guy Dodin

Adaptation to out-of-distribution data is a meta-challenge for all statistical learning algorithms that strongly rely on the i.i.d. assumption. It leads to unavoidable labor costs and confidence crises in realistic applications. For that,…

Computer Vision and Pattern Recognition · Computer Science 2022-07-26 Jingye Wang , Ruoyi Du , Dongliang Chang , Kongming Liang , Zhanyu Ma
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