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There is a rich history of models for the interaction of a biological contagion like influenza with the spread of related information such as an influenza vaccination campaign. Recent work on the spread of interacting contagions on networks…

Physics and Society · Physics 2020-09-02 Laurent Hébert-Dufresne , Dina Mistry , Benjamin M. Althouse

In ecology, the description of species composition and biodiversity calls for statistical methods that involve estimating features of interest in unobserved samples based on an observed one. In the last decade, the Bayesian nonparametrics…

Methodology · Statistics 2026-04-28 Alessandro Colombi , Raffaele Argiento , Federico Camerlenghi , Lucia Paci

Empirical studies of graphs have contributed enormously to our understanding of complex systems. Known today as network science, what was originally a theoretical study of graphs has grown into a more scientific exploration of communities…

Quantitative Methods · Quantitative Biology 2020-01-01 Ryan E. Langendorf , Debra S. Goldberg

Flocks of birds and schools of fish are familiar examples of spatial patterns formed by living organisms. In contrast to the patterns on the skins of, say, zebra and giraffe, the patterns of our interest are {\it transient} although…

Populations and Evolution · Quantitative Biology 2007-05-23 Debashish Chowdhury , Katsuhiro Nishinari , Andreas Schadschneider

The lifecycle of large language models (LLMs) is far more complex than that of traditional machine learning models, involving multiple training stages, diverse data sources, and varied inference methods. While prior research on data…

Cryptography and Security · Computer Science 2025-02-21 Pengfei He , Yue Xing , Han Xu , Zhen Xiang , Jiliang Tang

One 'problem' with the 21st century world, particularly the economic and business worlds, is the phenomenal and increasing number of interconnections between economic agents (consumers, firms, banks, markets, national economies). This…

Computational Engineering, Finance, and Science · Computer Science 2012-08-28 Paolo Magrassi

A branching L\'evy process can be seen as the continuous-time version of a branching random walk. It describes a particle system on the real line in which particles move and reproduce independently in a Poissonian manner. Just as for L\'evy…

Probability · Mathematics 2019-05-21 Jean Bertoin , Bastien Mallein

As large language models (LLMs) are increasingly embedded in everyday decision-making, their safety responsibilities extend beyond reacting to explicit harmful intent toward anticipating unintended but consequential risks. In this work, we…

Computation and Language · Computer Science 2026-02-25 Xuan Luo , Yubin Chen , Zhiyu Hou , Linpu Yu , Geng Tu , Jing Li , Ruifeng Xu

This article addresses broad trends in interdisciplinary research in physics where interactions with colleagues in fields such as computer science, ecology, or economics can often be derailed by unintentional clashes of methodologies and…

General Physics · Physics 2011-09-27 Reginald D. Smith

Network-forming organisms, like fungi and slime molds, dynamically reorganize their networks during foraging. The resulting re-routing of resource flows within the organism's network can significantly impact local ecosystems. In current…

Biological Physics · Physics 2024-09-02 Lisa Schick , Mirna Kramar , Karen Alim

Yule's 1925 paper introducing the branching model that bears his name was a landmark contribution to the biodiversity sciences. In his paper, Yule developed stochastic models to explain the observed distribution of species across genera and…

Populations and Evolution · Quantitative Biology 2024-10-16 Matt Pennell , Ailene MacPherson

Microbial networks, representing microbes as nodes and their interactions as edges, are crucial for understanding community dynamics in various environments. Analyzing microbiome networks is crucial for identifying keystone taxa that play…

Molecular Networks · Quantitative Biology 2025-07-15 Qiyao Yang , Rosa Aghdam , Reed Nelson , Claudia Solís-Lemus

Plants emission of volatile organic compounds (VOCs) is involved in a wide class of ecological functions, as VOCs play a crucial role in plants interactions with biotic and abiotic factors. Accordingly, they vary widely across species and…

Quantitative Methods · Quantitative Biology 2017-04-27 Gianna Vivaldo , Elisa Masi , Cosimo Taiti , Guido Caldarelli , Stefano Mancuso

Network ecologists investigate the structure, function, and evolution of ecological systems using network models and analyses. For example, network techniques have been used to study community interactions (i.e., food-webs, mutualisms),…

Quantitative Methods · Quantitative Biology 2015-04-16 Stuart R. Borrett , James Moody , Achim Edelmann

Who joins extremist movements? Answering this question poses considerable methodological challenges. Survey techniques are infeasible and selective samples provide no counterfactual. Recruits can be assigned to contextual units, but this is…

Methodology · Statistics 2022-05-18 Roberto Cerina , Christopher Barrie , Neil Ketchley , Aaron Zelin

Plant-pollinator mutualistic networks are asymmetric in their interactions: specialist plants are pollinated by generalist animals, while generalist plants are pollinated by a broad involving specialists and generalists. It has been…

Populations and Evolution · Quantitative Biology 2015-05-20 Guillermo Abramson , Claudia A. Trejo Soto , Leonardo Oña

The evolution of organismal populations is not typically thought of in terms of classical mechanics. However, many of the conceptual models used to approximate evolutionary trajectories have implicit parallels to dynamic physical systems.…

Adaptation and Self-Organizing Systems · Physics 2013-11-20 Bradly Alicea

Disasters impact communities through interconnected social, spatial, and physical networks. Analyzing network dynamics is crucial for understanding resilience and recovery. We highlight six studies demonstrating how hazards and recovery…

Social and Information Networks · Computer Science 2025-02-27 Chia-Fu Liu , Ali Mostafavi

Networks effectively capture interactions among components of complex systems, and have thus become a mainstay in many scientific disciplines. Growing evidence, especially from biology, suggest that networks undergo changes over time, and…

Methodology · Statistics 2020-03-10 Ali Shojaie

Insects play such a crucial role in ecosystems that a shift in demography of just a few species can have devastating consequences at environmental, social and economic levels. Despite this, evaluation of insect demography is strongly…

Computer Vision and Pattern Recognition · Computer Science 2022-11-04 Léonard Boussioux , Tomás Giro-Larraz , Charles Guille-Escuret , Mehdi Cherti , Balázs Kégl