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A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

Data Structures and Algorithms · Computer Science 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

The NP-hard 2-Club problem is, given an undirected graph G=(V,E) and l\in N, to decide whether there is a vertex set S\subseteq V of size at least l such that the induced subgraph G[S] has diameter at most two. We make progress towards a…

Computational Complexity · Computer Science 2013-05-17 Sepp Hartung , Christian Komusiewicz , André Nichterlein , Ondrej Suchý

The VC-dimension is a well-studied and fundamental complexity measure of a set system (or hypergraph) that is central to many areas of machine learning. We establish several new results on the complexity of computing the VC-dimension. In…

Computational Complexity · Computer Science 2025-10-24 Florent Foucaud , Harmender Gahlawat , Fionn Mc Inerney , Prafullkumar Tale

In this paper, we study several coloring problems on graphs from the viewpoint of parameterized complexity. We show that Precoloring Extension is fixed-parameter tractable (FPT) parameterized by distance to clique and Equitable Coloring is…

Data Structures and Algorithms · Computer Science 2020-05-29 I. Vinod Reddy

We investigate the parameterized complexity of several problems formalizing cluster identification in graphs. In other words we ask whether a graph contains a large enough and sufficiently connected subgraph. We study here three relaxations…

Computational Complexity · Computer Science 2023-03-23 Ambroise Baril , Antoine Castillon , Nacim Oijid

Given a static vertex-selection problem (e.g. independent set, dominating set) on a graph, we can define a corresponding temporally satisfying reconfiguration problem on a temporal graph which asks for a sequence of solutions to the…

Data Structures and Algorithms · Computer Science 2025-09-22 Tom Davot , Jessica Enright , Laura Larios-Jones

A set $D$ of vertices of a graph is a \emph{defensive alliance} if, for each element of $D$, the majority of its neighbours are in $D$. We consider the notion of local minimality in this paper. We are interested in finding a locally minimal…

Data Structures and Algorithms · Computer Science 2023-03-05 Ajinkya Gaikwad , Soumen Maity , Saket Saurabh

We examine ordered graphs, defined as graphs with linearly ordered vertices, from the perspective of homomorphisms (and colorings) and their complexities. We demonstrate the corresponding computational and parameterized complexities, along…

Computational Complexity · Computer Science 2025-12-01 Michal Čertík , Andreas Emil Feldmann , Jaroslav Nešetřil , Paweł Rzążewski

Dominating sets and resolving sets have important applications in control theory and computer science. In this paper, we introduce an edge-analog of the classical dominant metric dimension of graphs. By combining the concepts of a…

Combinatorics · Mathematics 2022-11-18 H. M. Ikhlaq , S. Hayat , H. M. A. Siddiqui

We investigate the structure of graphs of twin-width at most $1$, and obtain the following results: - Graphs of twin-width at most $1$ are permutation graphs. In particular they have an intersection model and a linear structure. - There is…

Discrete Mathematics · Computer Science 2025-01-03 Jungho Ahn , Hugo Jacob , Noleen Köhler , Christophe Paul , Amadeus Reinald , Sebastian Wiederrecht

We survey results concerning reconfigurations of colourings and dominating sets in graphs. The vertices of the $k$-colouring graph $\mathcal{C}_{k}(G)$ of a graph $G$ correspond to the proper $k$-colourings of a graph $G$, with two…

Combinatorics · Mathematics 2020-03-16 C. M. Mynhardt , S. Nasserasr

In this paper we study the problem of finding a small safe set $S$ in a graph $G$, i.e. a non-empty set of vertices such that no connected component of $G[S]$ is adjacent to a larger component in $G - S$. We enhance our understanding of the…

Computational Complexity · Computer Science 2019-02-01 Rémy Belmonte , Tesshu Hanaka , Ioannis Katsikarelis , Michael Lampis , Hirotaka Ono , Yota Otachi

An open-locating-dominating set of a graph models a detection system for a facility with a possible "intruder" or a multiprocessor network with a possible malfunctioning processor. A "sensor" or "detector" is assumed to be installed at a…

Combinatorics · Mathematics 2023-08-01 Devin Jean , Suk Seo

Let $G$ be a connected graph. A vertex $w$ strongly resolves a pair $u$, $v$ of vertices of $G$ if there exists some shortest $u-w$ path containing $v$ or some shortest $v-w$ path containing $u$. A set $W$ of vertices is a strong resolving…

Combinatorics · Mathematics 2013-09-04 Dorota Kuziak , Ismael G. Yero , Juan A. Rodríguez-Velázquez

A subset $S$ of vertices in a graph $G=(V, E)$ is a Dominating Set if each vertex in $V(G)\setminus S$ is adjacent to at least one vertex in $S$. Chellali et al. in 2013, by restricting the number of neighbors in $S$ of a vertex outside…

Computational Complexity · Computer Science 2024-11-20 Mohsen Alambardar Meybodi , Abolfazl Poureidi

The dominating set problem and its generalization, the distance-$r$ dominating set problem, are among the well-studied problems in the sequential settings. In distributed models of computation, unlike for domination, not much is known about…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-10-08 Saeed Akhoondian Amiri , Ben Wiederhake

Let $G$ be a graph. A dominating set $D\subseteq V(G)$ is a super dominating set if for every vertex $x\in V(G) \setminus D$ there exists $y\in D$ such that $N_G(y)\cap (V(G)\setminus D)) = \{x\}$. The cardinality of a smallest super…

Combinatorics · Mathematics 2023-02-20 Csilla Bujtás , Nima Ghanbari , Sandi Klavžar

Many graph problems were first shown to be fixed-parameter tractable using the results of Robertson and Seymour on graph minors. We show that the combination of finite, computable, obstruction sets and efficient order tests is not just one…

Computational Complexity · Computer Science 2013-05-15 Michael R. Fellows , Bart M. P. Jansen

In the $k$-Center problem, we are given a graph $G=(V,E)$ with positive edge weights and an integer $k$ and the goal is to select $k$ center vertices $C \subseteq V$ such that the maximum distance from any vertex to the closest center…

Computational Complexity · Computer Science 2020-08-18 Johannes Blum

In a graph $G$, a vertex subset $S\subseteq V(G)$ is said to be a dominating set of $G$ if every vertex not in $S$ is adjacent to a vertex in $S$. A dominating set $S$ of a graph $G$ is called a paired-dominating set if the induced subgraph…

Data Structures and Algorithms · Computer Science 2014-01-30 Ching-Chi Lin , Hai-Lun Tu
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