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Obtaining reliable and precise estimates of wildlife species abundance and distribution is essential for the conservation and management of animal populations and natural reserves. Spatial capture-recapture (SCR) models provide estimates of…

Recently developed spatial capture-recapture (SCR) models represent a major advance over traditional capture-recapture (CR) models because they yield explicit estimates of animal density instead of population size within an unknown area.…

Applications · Statistics 2014-01-29 Richard B. Chandler , J. Andrew Royle

We develop a multi-state model to estimate the size of a closed population from ecological capture-recapture studies. We consider the case where capture-recapture data are not of a simple binary form, but where the state of an individual is…

Applications · Statistics 2017-08-02 Hannah Worthington , Rachel S. McCrea , Ruth King , Richard A. Griffiths

Population size estimation based on the capture-recapture experiment is an interesting problem in various fields including epidemiology, criminology, demography, etc. In many real-life scenarios, there exists inherent heterogeneity among…

Methodology · Statistics 2023-08-01 Kiranmoy Chatterjee , Prajamitra Bhuyan

We present a spatial, individual-based predator-prey model in which dispersal is dependent on the local community. We determine species suitability to the biotic conditions of their local environment through a time and space varying fitness…

Populations and Evolution · Quantitative Biology 2008-07-21 Elise Filotas , Martin Grant , Lael Parrott , Per Arne Rikvold

Density dependence occurs at the individual level and thus is greatly influenced by spatial local heterogeneity in habitat conditions. However, density dependence is often evaluated at the population level, leading to difficulties or even…

Populations and Evolution · Quantitative Biology 2025-11-20 Qing Zhao , Yunyi Shen

Capture-recapture methods aim to estimate the size of a closed population on the basis of multiple incomplete enumerations of individuals. In many applications, the individual probability of being recorded is heterogeneous in the…

Methodology · Statistics 2016-06-08 James E. Johndrow , Kristian Lum , Daniel Manrique-Vallier

Spatiotemporal processes have the potential to be one of the most influential factors governing how fisheries targeting sedentary species respond to harvesting. Despite this, management strategy evaluation often fails to account for space…

Populations and Evolution · Quantitative Biology 2021-09-07 Christopher D. Nottingham , Russell B. Millar

Population size estimation based on capture-recapture experiment under triple record system is an interesting problem in various fields including epidemiology, population studies, etc. In many real life scenarios, there exists inherent…

Methodology · Statistics 2022-01-04 Kiranmoy Chatterjee , Prajamitra Bhuyan

Many imaging techniques for biological systems -- like fixation of cells coupled with fluorescence microscopy -- provide sharp spatial resolution in reporting locations of individuals at a single moment in time but also destroy the dynamics…

Subcellular Processes · Quantitative Biology 2024-05-15 Christopher E. Miles , Scott A. McKinley , Fangyuan Ding , Richard B. Lehoucq

Indirect information on population size, like pellet counts or volunteer counts, is the main source of information in most ecological studies and applied population management situations. Often, such observations are treaded as if they were…

Applications · Statistics 2016-09-27 Jonas Wallin , Kjell Wallin

Spatially explicit capture recapture (SECR) models have gained enormous popularity to solve abundance estimation problems in ecology. In this study, we develop a novel Bayesian SECR model that disentangles the process of animal movement…

Applications · Statistics 2018-01-01 Soumen Dey , Mohan Delampady , K. Ullas Karanth , Arjun M. Gopalaswamy

Territorial behaviour is widespread in the animal kingdom, with creatures seeking to gain parts of space for their exclusive use. It arises through a complicated interplay of many different behavioural features. Extracting and quantifying…

Populations and Evolution · Quantitative Biology 2015-01-26 Jonathan R. Potts , Mark A. Lewis

Several models of flocking have been promoted based on simulations with qualitatively naturalistic behavior. In this paper we provide the first direct application of computational modeling methods to infer flocking behavior from…

Other Quantitative Biology · Quantitative Biology 2015-05-30 Graciano Dieck Kattas , Xiao-Ke Xu , Michael Small

To study population dynamics, ecologists and wildlife biologists use relative abundance data, which are often subject to temporal preferential sampling. Temporal preferential sampling occurs when sampling effort varies across time. To…

Methodology · Statistics 2022-12-14 Michael R. Schwob , Mevin B. Hooten , Travis McDevitt-Galles

Markov community models have been applied to sessile organisms because such models facilitate estimation of transition probabilities by tracking species occupancy at many fixed observation points over multiple periods of time. Estimation of…

Applications · Statistics 2017-06-12 Keiichi Fukaya , J. Andrew Royle , Takehiro Okuda , Masahiro Nakaoka , Takashi Noda

The internal behaviour of a population is an important feature to take account of when modelling their dynamics. In line with kin selection theory, many social species tend to cluster into distinct groups in order to enhance their overall…

Methodology · Statistics 2023-11-02 Blake McGrane-Corrigan , Oliver Mason , Rafael de Andrade Moral

We are interested in modeling some two-level population dynamics, resulting from the interplay of ecological interactions and phenotypic variation of individuals (or hosts) and the evolution of cells (or parasites) of two types living in…

Probability · Mathematics 2011-01-21 Sylvie Méléard , Sylvie Roelly

Population size estimation based on two sample capture-recapture type experiment is an interesting problem in various fields including epidemiology, pubic health, population studies, etc. The Lincoln-Petersen estimate is popularly used…

Methodology · Statistics 2019-01-21 Kiranmoy Chatterjee , Prajamitra Bhuyan

We develop an inference framework for spatial capture-recapture data when two methods are used in which individuality cannot generally be reconciled between the two methods. A special case occurs in camera trapping when left-side (method 1)…

Methodology · Statistics 2015-04-21 J. Andrew Royle
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