English
Related papers

Related papers: Recognizing Cancer via Somatic and Organic Evoluti…

200 papers

In this work we present a flexible tool for tumor progression, which simulates the evolutionary dynamics of cancer. Tumor progression implements a multi-type branching process where the key parameters are the fitness landscape, the mutation…

Populations and Evolution · Quantitative Biology 2013-03-22 Johannes G. Reiter , Ivana Bozic , Krishnendu Chatterjee , Martin A. Nowak

Since the discovery of a cancer initiating side population in solid tumours, studies focussing on the role of so-called cancer stem cells in cancer initiation and progression have abounded. The biological interrogation of these cells has…

Tissues and Organs · Quantitative Biology 2013-08-22 Jacob G. Scott , Prakash Chinnaiyan , Alexander R. A. Anderson , Anita Hjelmeland , David Basanta

Tissue self-organization into defined and well-controlled three-dimensional structures is essential during development for the generation of organs. A similar, but highly deranged process might also occur during the aberrant growth of…

Cell Behavior · Quantitative Biology 2019-05-21 Abramo Agosti , Stefano Marchesi , Giorgio Scita , Pasquale Ciarletta

We investigate the dynamics of a colony of crawling, proliferating cells with a minimal, mechanical cell model. The cells consist of two disks, modelling the cell body and a pseudopod, connected by a finite extensible spring. The cells…

Cell Behavior · Quantitative Biology 2019-04-11 Simon K. Schnyder , John J. Molina , Ryoichi Yamamoto

In here presented in silico study we suggest a way how to implement the evolutionary principles into anti-cancer therapy design. We hypothesize that instead of its ongoing supervised adaptation, the therapy may be constructed as a…

Populations and Evolution · Quantitative Biology 2019-10-10 Branislav Brutovsky , Denis Horvath

Background: Radiotherapy outcomes are usually predicted using the Linear Quadratic model. However, this model does not integrate complex features of tumor growth, in particular cell cycle regulation. Methods: In this paper, we propose a…

Tissues and Organs · Quantitative Biology 2007-05-23 Benjamin Ribba , Thierry Colin , Santiago Schnell

We aim to understand the evolution of the genetic composition of cancer cell populations. To achieve this, we consider an individual-based model representing a cell population where cells divide, die and mutate along the edges of a finite…

Probability · Mathematics 2025-02-18 Vianney Brouard

It is widely recognized that reciprocal interactions between cells and their microenvironment, via mechanical forces and biochemical signaling pathways, regulate cell behaviors during normal development, homeostasis and disease progression…

Biological Physics · Physics 2024-12-05 Nonthakorn Olaranont , Chaozhen Wei , John Lowengrub , Min Wu

The rules governing cell division and differentiation are central to understanding the mechanisms of development, aging and cancer. By utilising inducible genetic labelling, recent studies have shown that the clonal population in transgenic…

Biological Physics · Physics 2009-11-13 Allon M. Klein , David P. Doupe , Philip H. Jones , Benjamin D. Simons

Neuroblastoma is a paediatric extracranial solid cancer that arises from the developing sympathetic nervous system and is characterised by an abnormal distribution of cell types in tumours compared to healthy infant tissues. In this paper,…

Quantitative Methods · Quantitative Biology 2025-03-03 Simon F. Martina-Perez , Luke A. Heirene , Jennifer C. Kasemeier , Paul M. Kulesa , Ruth E. Baker

Cancer progression is an example of a rapid adaptive process where evolving new traits is essential for survival and requires a high mutation rate. Precancerous cells acquire a few key mutations that drive rapid population growth and…

Populations and Evolution · Quantitative Biology 2015-06-18 Christopher McFarland , Leonid Mirny , Kirill S. Korolev

We consider the decision making by mammalian cells, looking them as dynamic systems with rhythms. We calculate the effective dimension of the cell division model of the healthy mammalian cells consistent with the data: it is described via a…

Cell Behavior · Quantitative Biology 2015-12-18 David B. Saakian

Cancer is a complex disease and thus is complicated to model. However, simple models that describe the main processes involved in tumoral dynamics, e.g., competition and mutation, can give us clues about cancer behaviour, at least…

Dynamical Systems · Mathematics 2014-11-25 V. Castillo , J. Tomas Lazaro , J. Sardanyes

Research into mechanisms of hematogenous metastasis has largely become genetic in focus, attempting to understand the molecular basis of `seed-soil' relationships. Preceeding this biological mechanism is the physical process of…

Tissues and Organs · Quantitative Biology 2013-09-20 Jacob G. Scott , Alexander G. Fletcher , Philip K. Maini , Alexander R. A. Anderson , Philip Gerlee

Metastasis represents one of the main clinical challenge in cancer treatment since it is associated with the majority of deaths. Recent technological advances allow quantification of the dynamics of the process by means of noninvasive…

Tissues and Organs · Quantitative Biology 2015-11-06 Sébastien Benzekry , J. M. L. Ebos

The self-organization of cells into complex tissues relies on a tight coordination of cell behavior. Identifying the cellular processes driving tissue growth is key to understanding the emergence of tissue forms and devising targeted…

Quantitative Methods · Quantitative Biology 2024-03-27 Ruslan Mukhamadiarov , Matteo Ciarchi , Fabrizio Olmeda , Steffen Rulands

The evolution of various competing cell types in tissues, and the resulting persistent tissue population, is studied numerically and analytically in a particle-based model of active tissues. Mutations change the properties of cells in…

Populations and Evolution · Quantitative Biology 2024-06-03 Tobias Büscher , Nirmalendu Ganai , Gerhard Gompper , Jens Elgeti

We investigate the dynamics of a nonlinear model for tumor growth within a cellular medium. In this setting the "tumor" is viewed as a multiphase flow consisting of cancerous cells in either proliferating phase or quiescent phase and a…

Analysis of PDEs · Mathematics 2015-03-31 Donatella Donatelli , Konstantina Trivisa

Lung cancer is a leading cause of cancer-related deaths worldwide. The spread of the disease from its primary site to other parts of the lungs, known as metastasis, significantly impacts the course of treatment. Early identification of…

Image and Video Processing · Electrical Eng. & Systems 2024-06-18 Teddy Lazebnik , Svetlana Bunimovich-Mendrazitsky

Cancers follow a clonal Darwinian evolution, with fitter subclones replacing more quiescent cells, ultimately giving rise to macroscopic disease. High-throughput genomics provides the opportunity to investigate these processes and determine…

Quantitative Methods · Quantitative Biology 2014-10-07 Sakellarios Zairis , Hossein Khiabanian , Andrew J. Blumberg , Raul Rabadan