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In spite of the large amount of existing neural models in the literature, there is a lack of a systematic review of the possible effect of choosing different initial conditions on the dynamic evolution of neural systems. In this short…

Neurons and Cognition · Quantitative Biology 2016-05-24 Pedro A. Valdes-Hernandez , Thomas Knoesche

Evolution in time-varying environments naturally leads to adaptable biological systems that can easily switch functionalities. Advances in the synthesis of environmentally-responsive materials therefore open up the possibility of creating a…

We study a model ecosystem by means of dynamical techniques from disordered systems theory. The model describes a set of species subject to competitive interactions through a background of resources, which they feed upon. Additionally…

Populations and Evolution · Quantitative Biology 2009-11-13 Yoshimi Yoshino , Tobias Galla , Kei Tokita

We give examples of measures on certain k-surfaces in R^d. These measures satisfy convolution estimates which are nearly optimal.

Classical Analysis and ODEs · Mathematics 2007-06-25 Daniel Oberlin

A unified framework for analyzing the existence of ground states in wide classes of elastic complex bodies is presented here. The approach makes use of classical semicontinuity results, Sobolev mappinngs and Cartesian currents. Weak…

Mathematical Physics · Physics 2008-02-12 Paolo Maria Mariano , Giuseppe Modica

We study a class of minimal geometric partial differential equations that serves as a framework to understand the evolution of boundaries between states in different pattern forming systems. The framework combines normal growth, curvature…

Analysis of PDEs · Mathematics 2023-11-06 James H. von Brecht , Scott G. McCalla , Eun Heui Kim

A recently developed theory of stochastic swimming is used to study the notion of coherence in active systems that couple via hydrodynamic interactions. It is shown that correlations between various modes of deformation in stochastic…

Biological Physics · Physics 2015-05-19 Ali Najafi , Ramin Golestanian

Numerous complex systems, both natural and artificial, are characterized by the presence of intertwined supply and/or drainage networks. Here we present a minimalist model of such co-evolving networks in a spatially continuous domain, where…

Adaptation and Self-Organizing Systems · Physics 2021-07-08 Shashank Kumar Anand , Milad Hooshyar , Jan Martin Nordbotten , Amilcare Porporato

Successful modeling of degradation performance data is essential for accurate reliability assessment and failure predictions of highly reliable product units. The degradation performance measurements over time are highly heterogeneous. Such…

Applications · Statistics 2021-08-17 Xuxue Sun , Wenjun Cai , Qiong Zhang , Mingyang Li

The adaptive evolution of a population under the influence of mutation and selection is strongly influenced by the structure of the underlying fitness landscape, which encodes the interactions between mutations at different genetic loci.…

Populations and Evolution · Quantitative Biology 2015-06-04 Jasper Franke , Joachim Krug

Landscapes are meaningful ecological units that strongly depend on the environmental conditions. Such dependencies between landscapes and the environment have been noted since the beginning of Earth sciences and cast into conceptual models…

Computer Vision and Pattern Recognition · Computer Science 2019-09-27 Christian Requena-Mesa , Markus Reichstein , Miguel Mahecha , Basil Kraft , Joachim Denzler

Beerenwinkel et al.(2007) suggested studying fitness landscapes via regular subdivisions of convex polytopes. Building on their approach we propose cluster partitions and cluster filtrations of fitness landscapes as a new mathematical tool.…

Quantitative Methods · Quantitative Biology 2019-05-06 Holger Eble , Michael Joswig , Lisa Lamberti , Will Ludington

A systematic Bayesian framework is developed for physics constrained parameter inference ofstochastic differential equations (SDE) from partial observations. The physical constraints arederived for stochastic climate models but are…

Data Analysis, Statistics and Probability · Physics 2016-11-25 Daniel Peavoy , Christian L. E. Franzke , Gareth O. Roberts

Evolution is simultaneously driven by a number of processes such as mutation, competition and random sampling. Understanding which of these processes is dominating the collective evolutionary dynamics in dependence on system properties is a…

Populations and Evolution · Quantitative Biology 2012-09-13 Hinrich Arnoldt , Marc Timme , Stefan Grosskinsky

The genotype-fitness map plays a fundamental role in shaping the dynamics of evolution. However, it is difficult to directly measure a fitness landscape in practice, because the number of possible genotypes is astronomical. One approach is…

Populations and Evolution · Quantitative Biology 2014-11-11 Jakub Otwinowski , Joshua B. Plotkin

When modeling longitudinal biomedical data, often dimensionality reduction as well as dynamic modeling in the resulting latent representation is needed. This can be achieved by artificial neural networks for dimension reduction, and…

Machine Learning · Statistics 2023-12-01 Göran Köber , Raffael Kalisch , Lara Puhlmann , Andrea Chmitorz , Anita Schick , Harald Binder

Sewall Wright's adaptive landscape metaphor penetrates a significant part of evolutionary thinking. Supplemented with Fisher's fundamental theorem of natural selection and Kimura's maximum principle, it provides a unifying and intuitive…

Populations and Evolution · Quantitative Biology 2017-05-05 Alexander S. Bratus , Artem S. Novozhilov , Yuri S. Semenov

This theoretical work defines the measure of autocorrelation of evolvability in the context of neutral fitness landscape. This measure has been studied on the classical MAX-SAT problem. This work highlight a new characteristic of neutral…

Artificial Intelligence · Computer Science 2007-09-26 Sébastien Verel , Philippe Collard , Manuel Clergue

We develop and apply a learning framework for parameter estimation in initial value problems that are assessed only indirectly via aggregate data such as sample means and/or standard deviations. Our comprehensive framework follows Bayesian…

Quantitative Methods · Quantitative Biology 2025-06-27 Stephen McCoy , Daniel McBride , D. Katie McCullough , Benjamin C. Calfee , Erik Zinser , David Talmy , Ioannis Sgouralis

To estimate casual treatment effects, we propose a new matching approach based on the reduced covariates obtained from sufficient dimension reduction. Compared to the original covariates and the propensity score, which are commonly used for…

Methodology · Statistics 2017-02-03 Wei Luo , Yeying Zhu
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