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Computer simulation plays a central role in modern day materials science. The utility of a given computational approach depends largely on the balance it provides between accuracy and computational cost. Molecular crystals are a class of…

With the advent of interconnected quantum computers, i.e., distributed quantum computing (DQC), multiple quantum computers can now collaborate via quantum networks to perform massively complex computational tasks. However, DQC faces…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-10-07 Napat Ngoenriang , Minrui Xu , Sucha Supittayapornpong , Dusit Niyato , Han Yu , Xuemin , Shen

Classical simulation of quantum computers is an irreplaceable step in the design of quantum algorithms. Exponential simulation costs demand the use of high-performance computing techniques, and in particular distribution, whereby the…

Quantum Physics · Physics 2023-11-06 Tyson Jones , Bálint Koczor , Simon C. Benjamin

Discrete dislocation dynamics (DDD) is a widely employed computational method to study plasticity at the mesoscale that connects the motion of dislocation lines to the macroscopic response of crystalline materials. However, the…

Materials Science · Physics 2023-05-24 Nicolas Bertin , Fei Zhou

In this work, a combined modelling approach for crack propagation in defective graphene is presented. Molecular dynamics (MD) simulations are used to obtain material parameters (Young's modulus and Poisson ratio) and to determine the energy…

Resilience is emerging as an evolving notion, reflecting a system's ability to endure and adapt to sudden and catastrophic changes and disruptions. This paper spotlights the significance of the quantitative resilience indices of…

Systems and Control · Electrical Eng. & Systems 2024-05-03 Maral Shadaei , Ali Hosseinipour , Javad Khazaei

We introduce a natively distributed mini-application benchmark representative of plastic spiking neural network simulators. It can be used to measure performances of existing computing platforms and to drive the development of future…

We present an easy to use and flexible grid library for developing highly scalable parallel simulations. The distributed cartesian cell-refinable grid (dccrg) supports adaptive mesh refinement and allows an arbitrary C++ class to be used as…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-01-30 I. Honkonen , S. von Alfthan , A. Sandroos , P. Janhunen , M. Palmroth

Modelling has become a third distinct line of scientific enquiry, alongside experiments and theory. Molecular dynamics (MD) simulations serve to interpret, predict and guide experiments and to test and develop theories. A major limiting…

We introduce the state-of-the-art deep learning Denoising Diffusion Probabilistic Model (DDPM) as a method to infer the volume or number density of giant molecular clouds (GMCs) from projected mass surface density maps. We adopt…

Astrophysics of Galaxies · Physics 2023-06-28 Duo Xu , Jonathan C. Tan , Chia-Jung Hsu , Ye Zhu

Molecular dynamics facilitates the simulation of a complex system to be analyzed at molecular and atomic levels. Simulations can last a long period of time, even months. Due to this cause the graphics processing units (GPUs) and multi-core…

Computational Physics · Physics 2021-02-02 Iuliana Marin , Nicolae Goga , Maria Goga

Molecular dynamics is widely used to study various phenomena, such as diffusion, shock wave propagation, and plasma dynamics. A wide range of software packages supports the expanding scope of molecular dynamics applications. However, the…

Computational Physics · Physics 2025-12-01 I. S. Galtsov , R. V. Muratov , G. V. Vyskvarko , S. A. Murzov , S. A. Dyachkov , P. R. Levashov

Recently, hybrid models have emerged that combine microscopic and mesoscopic regimes in a single stochastic reaction-diffusion simulation. Microscopic simulations track every individual molecule and are generally more accurate. Mesoscopic…

Emerging Technologies · Computer Science 2015-11-20 Adam Noel , Karen C. Cheung , Robert Schober

Plastic deformation In crystalline materials is controlled by the motion and interactions of dislocations [AND 17]. Discrete Dislocation Dynamics (DDD) simulations have now existed for about 25 years to investigate plastic flow at the…

Materials Science · Physics 2020-01-07 Sylvain Queyreau

Molecular dynamics (MD) simulations are used in biochemistry, physics, and other fields to study the motions, thermodynamic properties, and the interactions between molecules. Computational limitations and the complexity of these problems,…

Numerical Analysis · Mathematics 2018-01-17 F. Grogan , M. Holst , L. Lindblom , R. Amaro

The interplay of electronic and nuclear degrees of freedom presents an outstanding problem in condensed matter physics and chemistry. Computational challenges arise especially for large systems, long time scales, in nonequilibrium, or in…

Strongly Correlated Electrons · Physics 2024-02-14 Arne Schobert , Jan Berges , Erik G. C. P. van Loon , Michael A. Sentef , Sergey Brener , Mariana Rossi , Tim O. Wehling

Dynamic Mode Decomposition (DMD) is an unsupervised machine learning method that has attracted considerable attention in recent years owing to its equation-free structure, ability to easily identify coherent spatio-temporal structures in…

Machine Learning · Computer Science 2022-02-16 Alex Viguerie , Gabriel F. Barros , Malú Grave , Alessandro Reali , Alvaro L. G. A. Coutinho

Massive multiple-input multiple-output (MIMO) systems require downlink channel state information (CSI) at the base station (BS) to achieve spatial diversity and multiplexing gains. In a frequency division duplex (FDD) multiuser massive MIMO…

Signal Processing · Electrical Eng. & Systems 2020-09-09 Mahdi Boloursaz Mashhadi , Qianqian Yang , Deniz Gunduz

We employ quantum-volume random-circuit sampling to benchmark the two-QPU entanglement-assisted distributed quantum computing (DQC) and compare it with single-QPU quantum computing. We first specify a single-qubit depolarizing noise model…

Quantum Physics · Physics 2024-06-12 Shao-Hua Hu , George Biswas , Jun-Yi Wu

In the emerging field of Fault Tolerant Quantum Computation (FTQC), resource estimation is an important tool for quantitatively comparing prospective architectures, identifying hardware bottlenecks and informing which research paths are…

Quantum Physics · Physics 2026-04-24 Dmitry Filippov , Peter Yang , Prakash Murali