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We introduce data structures answering queries concerning the occurrences of patterns from a given dictionary $\mathcal{D}$ in fragments of a given string $T$ of length $n$. The dictionary is internal in the sense that each pattern in…

Data Structures and Algorithms · Computer Science 2019-09-26 Panagiotis Charalampopoulos , Tomasz Kociumaka , Manal Mohamed , Jakub Radoszewski , Wojciech Rytter , Tomasz Waleń

We study data structures in the presence of adversarial noise. We want to encode a given object in a succinct data structure that enables us to efficiently answer specific queries about the object, even if the data structure has been…

Data Structures and Algorithms · Computer Science 2008-12-01 Ronald de Wolf

We prove that uniform circuits of size n can be evaluated in space O(n/log n). Thus, Space(O(n)) is not in uniform Size(o(n*log n)). For uniformity, we only require that the circuit is O(n/log n)-Space uniform. We also generalize the…

Computational Complexity · Computer Science 2012-08-13 Dmytro Taranovsky

Permutation patterns and pattern avoidance are central, well-studied concepts in combinatorics and computer science. Given two permutations $\tau$ and $\pi$, the pattern matching problem (PPM) asks whether $\tau$ contains $\pi$. This…

Data Structures and Algorithms · Computer Science 2025-07-21 Benjamin Aram Berendsohn

Let S be a finite, ordered alphabet, and let x = x_1 x_2 ... x_n be a string over S. A "secondary index" for x answers alphabet range queries of the form: Given a range [a_l,a_r] over S, return the set I_{[a_l;a_r]} = {i |x_i \in [a_l;…

Databases · Computer Science 2008-11-19 Rasmus Pagh , S. Srinivasa Rao

While many optimization problems work with a fixed number of decision variables and thus a fixed-length representation of possible solutions, genetic programming (GP) works on variable-length representations. A naturally occurring problem…

Neural and Evolutionary Computing · Computer Science 2018-06-07 Benjamin Doerr , Timo Kötzing , J. A. Gregor Lagodzinski , Johannes Lengler

The choice dictionary is introduced as a data structure that can be initialized with a parameter $n\in\mathbb{N}=\{1,2,\ldots\}$ and subsequently maintains an initially empty subset $S$ of $\{1,\ldots,n\}$ under insertion, deletion,…

Data Structures and Algorithms · Computer Science 2017-03-17 Torben Hagerup , Frank Kammer

We study the self-stabilizing leader election problem in anonymous $n$-nodes networks. Achieving self-stabilization with low space memory complexity is particularly challenging, and designing space-optimal leader election algorithms remains…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-20 Lelia Blin , Sylvain Gay , Isabella Ziccardi

Motivated by storage applications, we study the following data structure problem: An encoder wishes to store a collection of jointly-distributed files $\overline{X}:=(X_1,X_2,\ldots, X_n) \sim \mu$ which are \emph{correlated}…

Data Structures and Algorithms · Computer Science 2019-07-26 Emanuele Viola , Omri Weinstein , Huacheng Yu

We study the problem of $2$-dimensional orthogonal range counting with additive error. Given a set $P$ of $n$ points drawn from an $n\times n$ grid and an error parameter $\eps$, the goal is to build a data structure, such that for any…

Data Structures and Algorithms · Computer Science 2016-05-24 Zhewei Wei , Ke Yi

Given a set of $n$ colored points $P \subset \mathbb{R}^d$ we wish to store $P$ such that, given some query region $Q$, we can efficiently report the colors of the points appearing in the query region, along with their frequencies. This is…

Computational Geometry · Computer Science 2026-03-13 Erwin Glazenburg , Frank Staals

We present a number of new results about range searching for colored (or "categorical") data: 1. For a set of $n$ colored points in three dimensions, we describe randomized data structures with $O(n\mathop{\rm polylog}n)$ space that can…

Data Structures and Algorithms · Computer Science 2020-03-27 Timothy M. Chan , Qizheng He , Yakov Nekrich

The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…

Many signal processing problems can be solved by maximizing the fitness of a segmented model over all possible partitions of the data interval. This letter describes a simple but powerful algorithm that searches the exponentially large…

We study population protocols: networks of anonymous agents that interact under a scheduler that picks pairs of agents uniformly at random. The _size counting problem_ is that of calculating the exact number $n$ of agents in the population,…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-15 David Doty , Mahsa Eftekhari , Othon Michail , Paul G. Spirakis , Michail Theofilatos

The range-minimum query (RMQ) problem is a fundamental data structuring task with numerous applications. Despite the fact that succinct solutions with worst-case optimal $2n+o(n)$ bits of space and constant query time are known, it has been…

Data Structures and Algorithms · Computer Science 2019-03-07 J. Ian Munro , Sebastian Wild

We present an explicit and efficient algebraic construction of capacity-achieving list decodable codes with both constant alphabet and constant list sizes. More specifically, for any $R \in (0,1)$ and $\epsilon>0$, we give an algebraic…

Computational Complexity · Computer Science 2021-06-11 Zeyu Guo , Noga Ron-Zewi

This paper introduces a new data-structural object that we call the tiny pointer. In many applications, traditional $\log n $-bit pointers can be replaced with $o (\log n )$-bit tiny pointers at the cost of only a constant-factor time…

Data Structures and Algorithms · Computer Science 2021-11-29 Michael A. Bender , Alex Conway , Martín Farach-Colton , William Kuszmaul , Guido Tagliavini

Several biological problems require the identification of regions in a sequence where some feature occurs within a target density range: examples including the location of GC-rich regions, identification of CpG islands, and sequence…

Data Structures and Algorithms · Computer Science 2013-08-15 Benjamin A. Burton , Mathias Hiron

We present a data structure that supports three-dimensional range reporting queries in $O(\log \log U + (\log \log n)^3+k)$ time and uses $O(n\log^{1+\eps} n)$ space, where $U$ is the size of the universe, $k$ is the number of points in the…

Data Structures and Algorithms · Computer Science 2009-04-24 Marek Karpinski , Yakov Nekrich