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The protein-ligand binding affinity (PLA) prediction goal is to predict whether or not the ligand could bind to a protein sequence. Recently, in PLA prediction, deep learning has received much attention. Two steps are involved in deep…

Quantitative Methods · Quantitative Biology 2024-05-21 Karim Abbasi , Parvin Razzaghi , Amin Ghareyazi , Hamid R. Rabiee

In this work, we propose a technique that utilizes a fully convolutional network (FCN) to localize image splicing attacks. We first evaluated a single-task FCN (SFCN) trained only on the surface label. Although the SFCN is shown to provide…

Computer Vision and Pattern Recognition · Computer Science 2018-02-26 Ronald Salloum , Yuzhuo Ren , C. -C. Jay Kuo

Detection of inconsistencies of double JPEG artefacts across different image regions is often used to detect local image manipulations, like image splicing, and to localize them. In this paper, we move one step further, proposing an…

Image and Video Processing · Electrical Eng. & Systems 2022-01-20 Yakun Niu , Benedetta Tondi , Yao Zhao , Rongrong Ni , Mauro Barni

We combine Artificial Immune Systems 'AIS', technology with Collaborative Filtering 'CF' and use it to build a movie recommendation system. We already know that Artificial Immune Systems work well as movie recommenders from previous work by…

Neural and Evolutionary Computing · Computer Science 2008-05-16 Uwe Aickelin , Qi Chen

The interaction between proteins and DNA is a key driving force in a significant number of biological processes such as transcriptional regulation, repair, recombination, splicing, and DNA modification. The identification of DNA-binding…

Quantitative Methods · Quantitative Biology 2017-05-10 Hamid Reza Hassanzadeh , Pushkar Kolhe , Charles L. Isbell , May D. Wang

Histopathological prognostication of neoplasia including most tumor grading systems are based upon a number of criteria. Probably the most important is the number of mitotic figures which are most commonly determined as the mitotic count…

Computer Vision and Pattern Recognition · Computer Science 2020-01-06 Marc Aubreville , Christof A. Bertram , Robert Klopfleisch , Andreas Maier

Approximate Bayesian computation (ABC) is a class of algorithmic methods in Bayesian inference using statistical summaries and computer simulations. ABC has become popular in evolutionary genetics and in other branches of biology. However…

Computation · Statistics 2011-05-03 Olivier Francois , Guillaume Laval

Mammography and ultrasound are extensively used by radiologists as complementary modalities to achieve better performance in breast cancer diagnosis. However, existing computer-aided diagnosis (CAD) systems for the breast are generally…

Image and Video Processing · Electrical Eng. & Systems 2020-09-24 Gavriel Habib , Nahum Kiryati , Miri Sklair-Levy , Anat Shalmon , Osnat Halshtok Neiman , Renata Faermann Weidenfeld , Yael Yagil , Eli Konen , Arnaldo Mayer

The ability to adapt medical image segmentation networks for a novel class such as an unseen anatomical or pathological structure, when only a few labelled examples of this class are available from local healthcare providers, is…

Image and Video Processing · Electrical Eng. & Systems 2022-01-19 Yiwen Li , Yunguan Fu , Qianye Yang , Zhe Min , Wen Yan , Henkjan Huisman , Dean Barratt , Victor Adrian Prisacariu , Yipeng Hu

Predicting students' academic performance has been a research area of interest in recent years with many institutions focusing on improving the students' performance and the education quality. The analysis and prediction of students'…

Computers and Society · Computer Science 2020-06-11 MohammadNoor Injadat , Abdallah Moubayed , Ali Bou Nassif , Abdallah Shami

Magnetic resonance imaging (MRI) is the non-invasive modality of choice for body tissue composition analysis due to its excellent soft tissue contrast and lack of ionizing radiation. However, quantification of body composition requires an…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Ismail Irmakci , Sarfaraz Hussein , Aydogan Savran , Rita R. Kalyani , David Reiter , Chee W. Chia , Kenneth W. Fishbein , Richard G. Spencer , Luigi Ferrucci , Ulas Bagci

The Fuzzy Gene Filter (FGF) is an optimised Fuzzy Inference System designed to rank genes in order of differential expression, based on expression data generated in a microarray experiment. This paper examines the effectiveness of the FGF…

Machine Learning · Computer Science 2011-08-24 Meir Perez , Tshilidzi Marwala

A Genetic Algorithm (GA) is proposed in which each member of the population can change schemata only with its neighbors according to a rule. The rule methodology and the neighborhood structure employ elements from the Cellular Automata (CA)…

Neural and Evolutionary Computing · Computer Science 2007-11-16 Vasileios Barmpoutis , Gary F. Dargush

Artificial intelligence (AI) is rapidly becoming one of the key technologies of this century. The majority of results in AI thus far have been achieved using deep neural networks trained with a learning algorithm called error…

Artificial Intelligence · Computer Science 2025-10-30 Tommaso Salvatori , Ankur Mali , Christopher L. Buckley , Thomas Lukasiewicz , Rajesh P. N. Rao , Karl Friston , Alexander Ororbia

Prediction of genetic biomarkers, e.g., microsatellite instability in colorectal cancer is crucial for clinical decision making. But, two primary challenges hamper accurate prediction: (1) It is difficult to construct a pathology-aware…

Quantitative Methods · Quantitative Biology 2026-03-31 Ling Zhang , Boxiang Yun , Ting Jin , Qingli Li , Xinxing Li , Yan Wang

In recent years, a standard computational pathology workflow has emerged where whole slide images are cropped into tiles, these tiles are processed using a foundation model, and task-specific models are built using the resulting…

Computer Vision and Pattern Recognition · Computer Science 2026-02-26 Eric Zimmermann , Julian Viret , Michal Zelechowski , James Brian Hall , Neil Tenenholtz , Adam Casson , George Shaikovski , Eugene Vorontsov , Siqi Liu , Kristen A Severson

Melanoma, one of most dangerous types of skin cancer, re-sults in a very high mortality rate. Early detection and resection are two key points for a successful cure. Recent research has used artificial intelligence to classify melanoma and…

Computer Vision and Pattern Recognition · Computer Science 2020-08-31 Cong Tri Pham , Mai Chi Luong , Dung Van Hoang , Antoine Doucet

Anderson acceleration (AA) is a well-known method for accelerating the convergence of iterative algorithms, with applications in various fields including deep learning and optimization. Despite its popularity in these areas, the…

Machine Learning · Computer Science 2023-08-25 Sarwan Ali , Prakash Chourasia , Murray Patterson

In this work we present a system based on a Deep Learning approach, by using a Convolutional Neural Network, capable of classifying protein chains of amino acids based on the protein description contained in the Protein Data Bank. Each…

Machine Learning · Computer Science 2021-11-04 Damiano Perri , Marco Simonetti , Andrea Lombardi , Noelia Faginas-Lago , Osvaldo Gervasi

This work explores the feasibility of specialized hardware implementing the Cortical Learning Algorithm (CLA) in order to fully exploit its inherent advantages. This algorithm, which is inspired in the current understanding of the mammalian…

Emerging Technologies · Computer Science 2024-05-06 Valentin Puente , José Ángel Gregorio
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