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The thermodynamical properties of heterogeneous DNA sequences are computed by path integral techniques applied to a nonlinear model Hamiltonian. The base pairs relative displacements are interpreted as time dependent paths whose amplitudes…

Statistical Mechanics · Physics 2010-05-12 Marco Zoli

Turing patterns are stationary, wave-like structures that emerge from the nonequilibrium assembly of reactive and diffusive components. While they are foundational in biophysics, their classical formulation relies on a single characteristic…

Soft Condensed Matter · Physics 2026-01-30 Siamak Mirfendereski , Ankur Gupta

We investigate an interacting particle model to simulate a foraging colony of ants, where each ant is represented as an active Brownian particle. The interactions among ants are mediated through chemotaxis, aligning their orientations with…

Analysis of PDEs · Mathematics 2024-09-10 Maria Bruna , Martin Burger , Oscar de Wit

Reaction diffusion systems with Turing instability and mass conservation are studied. In such systems, abrupt decays of stripes follow quasi-stationary states in sequence. At steady state, the distance between stripes is much longer than…

Pattern Formation and Solitons · Physics 2009-11-11 Shuji Ishihara , Mikiya Otsuji , Atsushi Mochizuki

Consider a graph where the sites are distributed in space according to a Poisson point process on $\mathbb R^n$. We study a population evolving on this network, with individuals jumping between sites with a rate which decreases…

Probability · Mathematics 2023-04-05 Vincent Bansaye , Michele Salvi

We experimentally study the occurrence of pattern formation during the slot-die coating of low-viscosity nearly Newtonian liquids onto Polyethylenterephthalat (PET)-substrates. In particular, it is demonstrated that with increase of the…

Subcritical Turing bifurcations of reaction-diffusion systems in large domains lead to spontaneous onset of well-developed localised patterns via the homoclinic snaking mechanism. This phenomenon is shown to occur naturally when balancing…

Pattern Formation and Solitons · Physics 2025-06-10 Víctor Breña-Medina , Alan Champneys

This paper addresses the question of how population diffusion affects the formation of the spatial patterns in the spatial epidemic model by Turing mechanisms. In particular, we present theoretical analysis to results of the numerical…

Populations and Evolution · Quantitative Biology 2009-09-29 Quan-Xing Liu , Zhen Jin

Localised structures appear in a wide variety of systems, arising from a pinning mechanism due to the presence of a small-scale pattern or an imposed grid. When there is a separation of lengthscales, the width of the pinning region is…

Pattern Formation and Solitons · Physics 2015-05-28 P. C. Matthews , H. Susanto

Self-organization, the ability of a system of microscopically interacting entities to shape macroscopically ordered structures, is ubiquitous in Nature. Spatio-temporal patterns are abundantly observed in a large plethora of applications,…

Pattern Formation and Solitons · Physics 2019-06-17 Malbor Asllani , Timoteo Carletti , Duccio Fanelli , Philip K. Maini

Nematic liquid crystals confined to geometrically as well as chemically patterned substrate on one end and a flat substrate with strong anchoring on the other is studied using non-Boltzmann Monte Carlo methods. We observe significant…

Soft Condensed Matter · Physics 2010-10-18 D. Jayasri , Regina Jose , K. P. N. Murthy , V. S. S. Sastry

In this paper, we investigate the complex dynamics of a spatial plankton-fish system with Holling type III functional responses. We have carried out the analytical study for both one and two dimensional system in details and found out a…

Pattern Formation and Solitons · Physics 2011-03-18 Ranjit Kumar Upadhyay , Weiming Wang , N. K. Thakur

We use various electrode layouts to tailor the profile of the electric field in a two-dimensional (2D) dielectric-barrier-discharge system, thereby creating spatial templates for the lateral distribution of discharge filaments. Our…

Plasma Physics · Physics 2013-05-07 Shaun Alsum , Margeaux Carter , Andrew Hess , Jacob Lampen , Matthew Walhout

The growth of laminar-turbulent band patterns in plane Couette flow is studied in the vicinity of the global stability threshold R_g below which laminar flow ultimately prevails. Appropriately tailored direct numerical simulations are…

Fluid Dynamics · Physics 2015-06-04 Paul Manneville

Pattern forming systems allow for a wealth of states, where wavelengths and orientation of patterns varies and defects disrupt patches of monocrystalline regions. Growth of patterns has long been recognized as a strong selection mechanism.…

Pattern Formation and Solitons · Physics 2023-02-28 Ryan Goh , Arnd Scheel

Shapes of biological membranes are dynamically regulated in living cells. Although membrane shape deformation by proteins at thermal equilibrium has been extensively studied, nonequilibrium dynamics have been much less explored. Recently,…

Biological Physics · Physics 2020-11-19 Naoki Tamemoto , Hiroshi Noguchi

We present a brief comparative investigation of the bifurcation structure related to the formation of two-dimensional deposition patterns as described by continuum models of Cahn-Hilliard type. These are, on the one hand a driven…

Pattern Formation and Solitons · Physics 2020-04-13 Phong-Minh Timmy Ly , Kevin David Joachim Mitas , Uwe Thiele , Svetlana V. Gurevich

Spatially localized 2-D spot patterns occur for a wide variety of two component reaction-diffusion systems in the singular limit of a large diffusivity ratio. Such localized, far-from-equilibrium, patterns are known to exhibit a wide range…

Pattern Formation and Solitons · Physics 2020-09-17 Tony Wong , Michael J. Ward

The diffusion-driven Turing instability is a potential mechanism for spatial pattern formation in numerous biological and chemical systems. However, engineering these patterns and demonstrating that they are produced by this mechanism is…

Biological Physics · Physics 2025-12-02 Antonio Matas-Gil , Robert G. Endres

In this work, we focus on an autocatalytic reaction-diffusion model and carry out multiple scale weakly nonlinear analysis. A cubic and a quadratic autocatalytic reaction system is analysed. We develop a framework to identify the critical…

Adaptation and Self-Organizing Systems · Physics 2024-07-04 Deepak Kumar , Subramaniam Pushpavanam