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A contemporary and exciting application of Groebner bases is their use in computational biology, particularly in the reverse engineering of gene regulatory networks from experimental data. In this setting, the data are typically limited to…

Commutative Algebra · Mathematics 2019-07-10 Winfried Just , Brandilyn Stigler

In this paper, we study the solving degrees for affine semi-regular sequences and their homogenized sequences. Some of our results are considered to give mathematically rigorous proofs of the correctness of methods for computing Gr\"{o}bner…

Commutative Algebra · Mathematics 2024-09-24 Momonari Kudo , Kazuhiro Yokoyama

We introduce the theory of monoidal Groebner bases, a concept which generalizes the familiar notion in a polynomial ring and allows for a description of Groebner bases of ideals that are stable under the action of a monoid. The main…

Commutative Algebra · Mathematics 2011-08-25 Christopher J. Hillar , Seth Sullivant

In this paper we consider systems of partial (multidimensional) linear difference equations. Specifically, such systems arise in scientific computing under discretization of linear partial differential equations and in computational high…

Symbolic Computation · Computer Science 2007-05-23 V. P. Gerdt

We present a formalization of Gr\"obner basis theory in Lean 4, built on top of Mathlib's infrastructure for multivariate polynomials and monomial orders. Our development covers the core foundations of Gr\"obner basis theory, including…

Commutative Algebra · Mathematics 2026-04-21 Junyu Guo , Hao Shen , Junqi Liu , Lihong Zhi

Faugere's F5 algorithm is one of the fastest known algorithms for the computation of Grobner bases. So far only the F5 Criterion is proved, whereas the second powerful criterion, the Rewritten Criterion, is not understood very well until…

Commutative Algebra · Mathematics 2008-12-03 Christian Eder

Let $I_1\subset I_2\subset\dots$ be an increasing sequence of ideals of the ring $\Bbb Z[X]$, $X=(x_1,\dots,x_n)$ and let $I$ be their union. We propose an algorithm to compute the Gr\"obner base of $I$ under the assumption that the…

Commutative Algebra · Mathematics 2024-12-04 S. Yu. Orevkov

Computing the critical points of a polynomial function $q\in\mathbb Q[X_1,\ldots,X_n]$ restricted to the vanishing locus $V\subset\mathbb R^n$ of polynomials $f_1,\ldots, f_p\in\mathbb Q[X_1,\ldots, X_n]$ is of first importance in several…

Symbolic Computation · Computer Science 2014-05-26 Pierre-Jean Spaenlehauer

Let K be a field equipped with a valuation. Tropical varieties over K can be defined with a theory of Gr{\"o}bner bases taking into account the valuation of K. Because of the use of the valuation, the theory of tropical Gr{\"o}bner bases…

Symbolic Computation · Computer Science 2020-09-07 Yuki Ishihara , Tristan Vaccon , Kazuhiro Yokoyama

We consider the Rosenfeld-Groebner algorithm for computing a regular decomposition of a radical differential ideal generated by a set of ordinary differential polynomials in n indeterminates. For a set of ordinary differential polynomials…

Commutative Algebra · Mathematics 2009-02-25 Oleg Golubitsky , Marina Kondratieva , Marc Moreno Maza , Alexey Ovchinnikov

A Gr\"obner basis computation for the Weyl algebra with respect to a tropical term order and by using a homogenization-dehomogenization technique is sufficiently sluggish. A significant number of reductions to zero occur. To improve the…

Symbolic Computation · Computer Science 2023-12-25 Ari Dwi Hartanto , Katsuyoshi Ohara

Over the past decade, the Gr\"obner basis theory and automatic solver generation have lead to a large number of solutions to geometric vision problems. In practically all cases, the derived solvers apply a fixed elimination template to…

Computer Vision and Pattern Recognition · Computer Science 2024-01-18 Wanting Xu , Lan Hu , Manolis C. Tsakiris , Laurent Kneip

We present an elegant, generic and extensive formalization of Gr\"obner bases in Isabelle/HOL. The formalization covers all of the essentials of the theory (polynomial reduction, S-polynomials, Buchberger's algorithm, Buchberger's criteria…

Logic in Computer Science · Computer Science 2018-05-02 Alexander Maletzky , Fabian Immler

We develop a method for approximating the Gr\"obner basis of the ideal of polynomials which vanish at a finite set of points, when the coordinates of the points are known with only limited precision. The method consists of a preprocessing…

Commutative Algebra · Mathematics 2007-05-23 Claudia Fassino

We provide a new complexity bound for the computation of grevlex Gr\"obner bases in the generic zero-dimensional case, relying on Moreno-Soc\'ias' conjecture. We first formalize a property of regular sequences that implies a well-known…

Symbolic Computation · Computer Science 2026-03-18 Robin Kouba , Vincent Neiger , Mohab Safey El Din

Nowadays, many strategies to solve polynomial systems use the computation of a Gr{\"o}bner basis for the graded reverse lexicographical ordering, followed by a change of ordering algorithm to obtain a Gr{\"o}bner basis for the…

Symbolic Computation · Computer Science 2016-02-03 Guénaël Renault , Tristan Vaccon

The aim of this article is to introduce standard bases of ideals in polynomial rings with respect to a class of orderings which are not necessarily semigroup orderings. Our approach generalises the concept of standard bases with respect to…

Algebraic Geometry · Mathematics 2007-05-23 Stephan Endrass

In this article we present two new algorithms to compute the Groebner basis of an ideal that is invariant under certain permutations of the ring variables and which are both implemented in SINGULAR (cf. [DGPS12]). The first and major…

Commutative Algebra · Mathematics 2013-04-10 Stefan Steidel

In this paper, a polynomial-time algorithm is given to compute the generalized Hermite normal form for a matrix F over Z[x], or equivalently, the reduced Groebner basis of the Z[x]-module generated by the column vectors of F. The algorithm…

Symbolic Computation · Computer Science 2016-07-22 Rui-Juan Jing , Chun-Ming Yuan , Xiao-Shan Gao

The low-rank matrix completion problem can be succinctly stated as follows: given a subset of the entries of a matrix, find a low-rank matrix consistent with the observations. While several low-complexity algorithms for matrix completion…

Information Theory · Computer Science 2010-06-11 Wei Dai , Ely Kerman , Olgica Milenkovic