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Related papers: Stirring by swimmers in confined microenvironments

200 papers

Microorganisms are rarely found in Nature swimming freely in an unbounded fluid. Instead, they typically encounter other organisms, hard walls, or deformable boundaries such as free interfaces or membranes. Hydrodynamic interactions between…

Fluid Dynamics · Physics 2013-10-21 Marcelo A. Dias , Thomas R. Powers

We use the boundary element method to study the low-Reynolds number locomotion of a spherical model microorganism in a circular tube. The swimmer propels itself by tangen- tial or normal surface motion in a tube whose radius is on the order…

Fluid Dynamics · Physics 2013-06-11 Lailai Zhu , Eric Lauga , Luca Brandt

The rotational diffusive motion of a self-propelled, attractive spherical colloid immersed in a solution of self-avoiding polymers is studied by mesoscale hydrodynamic simulations. A drastic enhancement of the rotational diffusion by more…

Soft Condensed Matter · Physics 2020-03-09 Kai Qi , Elmar Westphal , Gerhard Gompper , Roland G. Winkler

We study the dynamics of a tracer in a dense mixture of particles connected to different thermostats. Starting from the overdamped Langevin equations that describe the evolution of the system, we derive the expression of the self-diffusion…

Soft Condensed Matter · Physics 2022-12-28 Marie Jardat , Vincent Dahirel , Pierre Illien

The hydrodynamic flow field generated by self-propelled active particles and swimming microorganisms is strongly altered by the presence of nearby boundaries in a viscous flow. Using a simple model three-linked sphere swimmer, we show that…

Fluid Dynamics · Physics 2018-04-18 Abdallah Daddi-Moussa-Ider , Maciej Lisicki , Christian Hoell , Hartmut Löwen

Inspired by recent experiments using synthetic microswimmers to manipulate droplets, we investigate the low-Reynolds-number locomotion of a model swimmer (a spherical squirmer) encapsulated inside a droplet of comparable size in another…

Soft Condensed Matter · Physics 2017-03-14 Shang Yik Reigh , Lailai Zhu , François Gallaire , Eric Lauga

We study the small scale clustering of gyrotactic swimmers transported by a turbulent flow, when the intrinsic variability of the swimming parameters within the population is considered. By means of extensive numerical simulations, we find…

Fluid Dynamics · Physics 2017-02-22 Matteo Borgnino , Filippo De Lillo , Guido Boffetta

Recent research has shown that motile cells can adapt their mode of propulsion depending on the environment in which they find themselves. One mode is swimming by blebbing or other shape changes, and in this paper we analyze a class of…

Fluid Dynamics · Physics 2016-10-10 Qixuan Wang , Hans G. Othmer

We investigate the behavior of a treadmilling microswimmer in a two-dimensional unbounded domain with a semi-infinite no-slip wall. The wall can also be regarded as a probe or pipette inserted into the flow. We solve the governing evolution…

Biological Physics · Physics 2014-08-21 Kiori Obuse , Jean-Luc Thiffeault

Inspired by the classical Kepler and Rutherford problem, we investigate an analogous set-up in the context of active microswimmers: the behavior of a deformable microswimmer in a swirl flow. First we identify new steady bound states in the…

Soft Condensed Matter · Physics 2014-09-11 Mitsusuke Tarama , Andreas M. Menzel , Hartmut Löwen

We numerically study the dynamics of run-and-tumble particles confined in two chambers connected by thin channels. Two dominant dynamical behaviors emerge: (i) an oscillatory pumping state, in which particles periodically fill the two…

Soft Condensed Matter · Physics 2015-11-04 M. Paoluzzi , R. Di Leonardo , L. Angelani

We describe the motion of a tracer in an environment given by a kinetically constrained spin model (KCSM) at equilibrium. We check convergence of its trajectory properly rescaled to a Brownian motion and positivity of the diffusion…

Probability · Mathematics 2015-05-18 Oriane Blondel

We investigate the dynamics of the Fisher equation for the spreading of micro-organisms in one dimension subject to both turbulent convection and diffusion. We show that for strong enough turbulence, bacteria, for example, track in a…

Populations and Evolution · Quantitative Biology 2015-05-13 Roberto Benzi , David R. Nelson

We analyze a nonlinear PDE system describing the motion of a microswimmer in a nematic liquid crystal environment. For the microswimmer's motility, the squirmer model is used in which self-propulsion enters the model through the slip…

Analysis of PDEs · Mathematics 2022-08-24 Leonid Berlyand , Hai Chi , Mykhailo Potomkin , Nung Kwan Yip

We demonstrate with experiments and simulations how microscopic self-propelled particles navigate through environments presenting complex spatial features, which mimic the conditions inside cells, living organisms and future lab-on-a-chip…

Biological Physics · Physics 2011-09-22 Giovanni Volpe , Ivo Buttinoni , Dominik Vogt , Hans-Juergen Kuemmerer , Clemens Bechinger

Microswimmers exhibit an intriguing, highly-dynamic collective motion with large-scale swirling and streaming patterns, denoted as active turbulence -- reminiscent of classical high-Reynolds-number hydrodynamic turbulence. Various…

Soft Condensed Matter · Physics 2024-06-03 Kai Qi , Elmar Westphal , Gerhard Gompper , Roland G. Winkler

Many microorganisms find themselves immersed in fluids displaying non-Newtonian rheological properties such as viscoelasticity and shear-thinning viscosity. The effects of viscoelasticity on swimming at low Reynolds numbers have already…

Fluid Dynamics · Physics 2015-11-10 Charu Datt , Lailai Zhu , Gwynn J. Elfring , On Shun Pak

External gradients can strongly influence the collective behavior of microswimmers. In this paper, we study the behavior of two hydrodynamically interacting self-propelled chiral swimmers, in the low-Reynolds number regime, under the…

Biological Physics · Physics 2023-01-04 Ruma Maity , P. S. Burada

After colliding with a surface, microswimmers reside there during the detention time. They accumulate and may form complex structures such as biofilms. We introduce a general framework to calculate the distribution of detention times using…

Soft Condensed Matter · Physics 2015-07-21 Konstantin Schaar , Andreas Zöttl , Holger Stark

In Stokes flow, Purcell's scallop theorem forbids objects with time-reversible (reciprocal) swimming strokes from moving. In the presence of inertia, this restriction is eased and reciprocally deforming bodies can swim. A number of recent…

Fluid Dynamics · Physics 2022-11-30 Nicholas J. Derr , Thomas Dombrowski , Chris H. Rycroft , Daphne Klotsa