Related papers: The Web of Life
Many real world systems need to operate on heterogeneous information networks that consist of numerous interacting components of different types. Examples include systems that perform data analysis on biological information networks; social…
An ecological network is a formal representation of a specific type of interaction in a corresponding ecosystem. Such networks have traditionally been modelled as encoding exclusively pairwise interactions among the fundamental units of…
Networks provide a meaningful way to represent and analyze complex biological information, but the methodological details of network-based tools are often described for a technical audience. Graphery is a hands-on tutorial webserver…
To enable materials databases supporting computational and experimental research, it is critical to develop platforms that both facilitate access to the data and provide the tools used to generate/analyze it - all while considering the…
Molecular biology knowledge can be systematically represented in a computer-readable form as a comprehensive map of molecular interactions. There exist a number of maps of molecular interactions containing detailed description of various…
In this paper, we discuss the physical web projects based on network proximity for Smart Cities. In general, the Physical Web is an approach for connecting any physical object to the web. With this approach, we can navigate and control…
World Wide Web (WWW) is the most popular global information sharing and communication system consisting of three standards .i.e., Uniform Resource Identifier (URL), Hypertext Transfer Protocol (HTTP) and Hypertext Mark-up Language (HTML).…
Epistemic AI accelerates biomedical discovery by finding hidden connections in the network of biomedical knowledge. The Epistemic AI web-based software platform embodies the concept of knowledge mapping, an interactive process that relies…
We review theoretical approaches to the understanding of food webs. After an overview of the available food web data, we discuss three different classes of models. The first class comprise static models, which assign links between species…
Molecular biology data are subject to terms of use that vary widely between databases and curating institutions. This research presents a taxonomy of contractual and technical restrictions applicable to databases in life science. It builds…
The Web is ubiquitous, increasingly populated with interconnected data, services, people, and objects. Semantic web technologies (SWT) promote uniformity of data formats, as well as modularization and reuse of specifications (e.g.,…
A huge amount of information is produced in digital form. The Semantic Web stems from the realisation that dealing efficiently with this production requires getting better at interlinking digital informational resources together. Its focus…
This article introduces the Data Retrieval Web Engine (also referred to as doctor web), a flexible and modular tool for extracting structured data from web pages using a simple query language. We discuss the engineering challenges addressed…
The body of knowledge accumulated in recent years on the structure and the dynamics of complex networks has offered useful insights on the behaviour of many natural and artificial complex systems. The analysis of some of these, namely those…
Networks are important representations in computer science to communicate structural aspects of a given system of interacting components. The evolution of a network has several topological properties that can provide us information on the…
Opportunistic networking is one way to realize pervasive applications while placing little demand on network infrastructure, especially for operating in less well connected environments. In contrast to the ubiquitous network access model…
This paper presents an interactive implementation which makes the link between a human operator and a system of a administration of a relational databases MySQL. This application conceived as a multimedia presentations is illustrative for…
In recent years, the study of complex networks has received a lot of attention. Real systems have gained importance in scientific publications, despite of an important drawback: the difficulty of retrieving and manage such great quantity of…
This half day workshop explores challenges in data search, with a particular focus on data on the web. We want to stimulate an interdisciplinary discussion around how to improve the description, discovery, ranking and presentation of…
The fast-growing Web API landscape brings clients more options than ever before---in theory. In practice, they cannot easily switch between different providers offering similar functionality. We discuss a vision for developing Web APIs…