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Related papers: The Web of Life

200 papers

Because of the increasing number of electronic data, designing efficient tools to retrieve and exploit documents is a major challenge. Current search engines suffer from two main drawbacks: there is limited interaction with the list of…

Information Retrieval · Computer Science 2010-12-09 Sylvie Ranwez , Vincent Ranwez , Mohameth-François Sy , Jacky Montmain , Michel Crampes

Data collection is a key component of an information system. The widespread penetration of ICT tools in organizations and institutions has resulted in a shift in the way the data is collected. Data may be collected in printed-form, by…

Computers and Society · Computer Science 2013-03-27 Ruchika Thukral , Anita Goel

Current research in biology heavily depends on the availability and efficient use of information. In order to build new knowledge, various sources of biological data must often be combined. Semantic Web technologies, which provide a common…

Quantitative Methods · Quantitative Biology 2009-02-19 Claude Pasquier

We compare two distinct approaches for querying data in the context of the life sciences. The first approach utilizes conventional databases to store the data and intuitive form-based interfaces to facilitate easy querying of the data.…

Information Retrieval · Computer Science 2012-10-03 Amir H. Asiaee , Prashant Doshi , Todd Minning , Satya Sahoo , Priti Parikh , Amit Sheth , Rick L. Tarleton

This paper describes GeoPl@ntNet, an interactive web application designed to make Essential Biodiversity Variables accessible and understandable to everyone through dynamic maps and fact sheets. Its core purpose is to allow users to explore…

Quantitative Methods · Quantitative Biology 2026-04-15 Lukas Picek , César Leblanc , Alexis Joly , Pierre Bonnet , Rémi Palard , Maximilien Servajean

In this paper, we present the Physical Web Browser project for web applications depending on the environment. At this moment, many of users all over the world visit websites using their mobile devices only. Any mobile device (e.g.,…

Networking and Internet Architecture · Computer Science 2016-03-15 Dmitry Namiot , Manfred Sneps-Sneppe

BEFANA is a free and open-source software tool for ecological network analysis and visualisation. It is adapted to ecologists' needs and allows them to study the topology and dynamics of ecological networks as well as apply selected machine…

Quantitative Methods · Quantitative Biology 2026-03-12 Martin Marzidovšek , Vid Podpečan , Erminia Conti , Marko Debeljak , Christian Mulder

In this paper, we describe a Graphical User Interface (GUI) designed to manage large quantities of image data of a biological system. After setting the design requirements for the system, we developed an ecology quantification GUI that…

Quantitative Methods · Quantitative Biology 2008-01-08 Nigel J. Burroughs , George D. Tsibidis , William Gaze , Liz Wellington

Retrieve information resources made by the machine processing may refer to multiple sources. A personal web as part of information resources in the Internet requires a feature that can be understood by computer machines. Therefore, in this…

Digital Libraries · Computer Science 2013-12-23 Istiadi , Azhari

Interactions between people and ecological systems, through leisure or tourism activities, form a complex socio-ecological spatial network. The analysis of the benefits people derive from their interactions with nature -- also referred to…

The Web community has introduced a set of standards and technologies for representing, querying, and manipulating a globally distributed data structure known as the Web of Data. The proponents of the Web of Data envision much of the world's…

Artificial Intelligence · Computer Science 2009-08-05 Marko A. Rodriguez

The emerging Web of Data utilizes the web infrastructure to represent and interrelate data. The foundational standards of the Web of Data include the Uniform Resource Identifier (URI) and the Resource Description Framework (RDF). URIs are…

Artificial Intelligence · Computer Science 2011-08-05 Marko A. Rodriguez

Many ontologies have been developed in biology and these ontologies increasingly contain large volumes of formalized knowledge commonly expressed in the Web Ontology Language (OWL). Computational access to the knowledge contained within…

Databases · Computer Science 2015-02-02 Robert Hoehndorf , Luke Slater , Paul N. Schofield , Georgios V. Gkoutos

Many real-world complex systems such as social, biological, information as well as technological systems results of a decentralized and unplanned evolution which leads to a common structuration. Irrespective of their origin, these so-called…

Social and Information Networks · Computer Science 2013-05-03 Chantal Cherifi , Jean-François Santucci

The semantic linked data model is at the core of the Web due to its ability to model real world entities, connect them via relationships and provide context, which could help to transform data into information and information into…

Human-Computer Interaction · Computer Science 2021-03-12 Anelia Kurteva , Hélène De Ribaupierre

In computer interfaces in general, especially in information retrieval tasks, it is important to be able to quickly find and retrieve information. State of the art approach, used, for example, in search engines, is not effective as it…

Information Retrieval · Computer Science 2015-02-20 Dmytro Filatov , Taras Filatov

Research in the Life Sciences depends on the integration of large, distributed and heterogeneous data sources and web services. The discovery of which of these resources are the most appropriate to solve a given task is a complex research…

Artificial Intelligence · Computer Science 2010-12-09 Maria Perez , Rafael Berlanga , Ismael Sanz

Microbial networks, representing microbes as nodes and their interactions as edges, are crucial for understanding community dynamics in various environments. Analyzing microbiome networks is crucial for identifying keystone taxa that play…

Molecular Networks · Quantitative Biology 2025-07-15 Qiyao Yang , Rosa Aghdam , Reed Nelson , Claudia Solís-Lemus

The web of data consists of data published on the web in such a way that they can be interpreted and connected together. It is thus critical to establish links between these data, both for the web of data and for the semantic web that it…

Artificial Intelligence · Computer Science 2011-07-25 François Scharffe , Jérôme Euzenat

A map is an abstract visual representation of a region, taken from a given space, usually designed for final human consumption. Traditional cartography focuses on the mapping of Euclidean spaces by using some distance metric. In this paper…

Digital Libraries · Computer Science 2013-03-26 Valeria Fionda , Claudio Gutierrez , Giuseppe Pirró
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