English
Related papers

Related papers: A-infinity Persistence

200 papers

Persistent homology, a central tool of topological data analysis, provides invariants of data called barcodes (also known as persistence diagrams). A barcode is simply a multiset of real intervals. Recent work of Edelsbrunner, Jablonski,…

Algebraic Topology · Mathematics 2020-10-12 Ulrich Bauer , Michael Lesnick

In persistent topology, q-tame modules appear as a natural and large class of persistence modules indexed over the real line for which a persistence diagram is definable. However, unlike persistence modules indexed over a totally ordered…

Representation Theory · Mathematics 2014-05-23 Frederic Chazal , William Crawley-Boevey , Vin de Silva

Let $A$ be a finite or countable alphabet and let $\theta$ be literal (anti)morphism onto $A^*$ (by definition, such a correspondence is determinated by a permutation of the alphabet). This paper deals with sets which are invariant under…

Discrete Mathematics · Computer Science 2017-07-28 Jean Néraud , Carla Selmi

Persistent homology is one of the most active branches of Computational Algebraic Topology with applications in several contexts such as optical character recognition or analysis of point cloud data. In this paper, we report on the formal…

Logic in Computer Science · Computer Science 2012-09-11 Jónathan Heras , Thierry Coquand , Anders Mörtberg , Vincent Siles

We introduce a multiscale topological description of the Megaparsec weblike cosmic matter distribution. Betti numbers and topological persistence offer a powerful means of describing the rich connectivity structure of the cosmic web and of…

Cosmology and Nongalactic Astrophysics · Physics 2019-02-27 Pratyush Pranav , Herbert Edelsbrunner , Rien van de Weygaert , Gert Vegter , Michael Kerber , Bernard J. T. Jones , Mathijs Wintraecken

We propose a general technique for extracting a larger set of stable information from persistent homology computations than is currently done. The persistent homology algorithm is usually viewed as a procedure which starts with a filtered…

Computational Geometry · Computer Science 2021-01-29 Paul Bendich , Peter Bubenik , Alexander Wagner

In topological data analysis (TDA), one often studies the shape of data by constructing a filtered topological space, whose structure is then examined using persistent homology. However, a single filtered space often does not adequately…

Algebraic Topology · Mathematics 2023-03-14 Magnus Bakke Botnan , Michael Lesnick

We study robust properties of zero sets of continuous maps $f:X\to\mathbb{R}^n$. Formally, we analyze the family $Z_r(f)=\{g^{-1}(0):\,\,\|g-f\|<r\}$ of all zero sets of all continuous maps $g$ closer to $f$ than $r$ in the max-norm. The…

Algebraic Topology · Mathematics 2017-04-18 Peter Franek , Marek Krčál

Persistent homology is a powerful tool for characterizing the topology of a data set at various geometric scales. When applied to the description of molecular structures, persistent homology can capture the multiscale geometric features and…

Quantitative Methods · Quantitative Biology 2018-07-31 Zixuan Cang , Guo-Wei Wei

We give bounds for dimension 0 persistent homology and codimension 1 homology of Vietoris--Rips, alpha, and cubical complex filtrations from finite sets related by enrichment (adding new elements), sparsification (removing elements), and…

Algebraic Topology · Mathematics 2025-12-05 Jānis Lazovskis , Ran Levi , Juliano Morimoto

Persistent Homology is a widely used topological data analysis tool that creates a concise description of the topological properties of a point cloud based on a specified filtration. Most filtrations used for persistent homology depend…

Algebraic Topology · Mathematics 2024-06-05 Vincent P. Grande , Michael T. Schaub

We obtain new invariants of topological link concordance and homology cobordism of 3-manifolds from Hirzebruch-type intersection form defects of towers of iterated p-covers. Our invariants can extract geometric information from an arbitrary…

Geometric Topology · Mathematics 2008-06-16 Jae Choon Cha

We address the problem of estimating topological features from data in high dimensional Euclidean spaces under the manifold assumption. Our approach is based on the computation of persistent homology of the space of data points endowed with…

Machine Learning · Statistics 2023-01-23 Ximena Fernández , Eugenio Borghini , Gabriel Mindlin , Pablo Groisman

We study (not necessarily connected) Z-graded A-infinity-algebras and their A-infinity-modules. Using the cobar and the bar construction and Quillen's homotopical algebra, we describe the localisation of the category of A-infinity-algebras…

Category Theory · Mathematics 2007-05-23 Kenji Lefèvre-Hasegawa

Topology describes properties of physical systems that remain constant under continuous deformations. For infinite vector waves, global topological invariants in position space are typically associated with periodic patterns. We demonstrate…

Protein fold classification is a classic problem in structural biology and bioinformatics. We approach this problem using persistent homology. In particular, we use alpha shape filtrations to compare a topological representation of the data…

Biomolecules · Quantitative Biology 2021-08-23 W. Hamilton , J. E. Borgert , T. Hamelryck , J. S. Marron

Topological data analysis is becoming increasingly relevant to support the analysis of unstructured data sets. A common assumption in data analysis is that the data set is a sample---not necessarily a uniform one---of some high-dimensional…

Algebraic Topology · Mathematics 2021-01-20 Bastian Rieck , Markus Banagl , Filip Sadlo , Heike Leitte

We propose a refinement of the Betti numbers and of the homology with coefficients in a field of a compact ANR in the presence of a continuous real valued function. The refinement of Betti numbers consists of finite configurations of points…

Algebraic Topology · Mathematics 2018-03-16 Dan Burghelea

The theory of multidimensional persistence captures the topology of a multifiltration -- a multiparameter family of increasing spaces. Multifiltrations arise naturally in the topological analysis of scientific data. In this paper, we give a…

Computational Geometry · Computer Science 2010-11-22 Gunnar Carlsson , Gurjeet Singh , Afra Zomorodian

We present a new formalism for studying the topology of HII regions during the Epoch of Reionisation, based on persistent homology theory. With persistent homology, it is possible to follow the evolution of topological features over time.…

Cosmology and Nongalactic Astrophysics · Physics 2019-04-10 Willem Elbers , Rien van de Weygaert