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Repository summarization is a crucial research question in development and maintenance for software engineering. Existing repository summarization techniques primarily focus on summarizing code according to the directory tree, which is…

Software Engineering · Computer Science 2025-10-14 Yifeng Zhu , Xianlin Zhao , Xutian Li , Yanzhen Zou , Haizhuo Yuan , Yue Wang , Bing Xie

Retrieval-augmented generation systems often suffer from a gap between optimizing retrieval relevance and generative utility. With such a gap, retrieved documents may be topically relevant but still lack the content needed for effective…

Computation and Language · Computer Science 2026-01-08 Jaeyoung Kim , Jongho Kim , Seung-won Hwang , Seoho Song , Young-In Song

This paper describes and illustrates the functionality of the baker R package. The package estimates a suite of nested partially-latent class models (NPLCM) for multivariate binary responses that are observed under a case-control design.…

Methodology · Statistics 2022-02-25 Irena B Chen , Qiyuan Shi , Scott L Zeger , Zhenke Wu

Machine learning decision systems are getting omnipresent in our lives. From dating apps to rating loan seekers, algorithms affect both our well-being and future. Typically, however, these systems are not infallible. Moreover, complex…

Machine Learning · Statistics 2022-02-15 Jakub Wiśniewski , Przemysław Biecek

LLMs have demonstrated significant potential in code generation tasks, achieving promising results at the function or statement level across various benchmarks. However, the complexities associated with creating code artifacts like classes,…

Software Engineering · Computer Science 2024-06-06 Ajinkya Deshpande , Anmol Agarwal , Shashank Shet , Arun Iyer , Aditya Kanade , Ramakrishna Bairi , Suresh Parthasarathy

A new generation of digital repositories could be based on direct representation of the contents with rich semantics and models rather than be collections of documents. The contents of such repositories would be highly structured which…

Digital Libraries · Computer Science 2015-12-31 Robert Burnell Allen

Everything that exists in R is an object [Chambers2016]. This article examines what would be possible if we kept copies of all R objects that have ever been created. Not only objects but also their properties, meta-data, relations with…

Computation · Statistics 2018-07-09 Przemyslaw Biecek , Marcin Kosinski

Data leakage remains a recurrent source of optimistic bias in biomedical machine learning studies. Standard row-wise cross-validation and globally estimated preprocessing steps are often inappropriate for data with repeated measurements,…

Computation · Statistics 2026-04-14 Selçuk Korkmaz

Large language models can answer questions about textbooks, lecture notes, and programming exercises more reliably when their answers are grounded in an explicit knowledge source. Retrieval-augmented generation (RAG) is a common approach:…

Information Retrieval · Computer Science 2026-05-25 Tom Verhoeff

This paper proposes a procedure to execute external source codes from a LaTeX document and include the calculation outputs in the resulting Portable Document Format (pdf) file automatically. It integrates programming tools into the LaTeX…

Software Engineering · Computer Science 2021-06-29 Haim Bar , HaiYing Wang

Adding citations while drafting in LaTeX often requires leaving the editor, searching for a paper in mind, copying its BibTeX entry into the project bibliography, renaming the cite key, and then returning to the sentence. \texttt{OverCite}…

Digital Libraries · Computer Science 2026-04-20 Cheyanne Shariat

Third-party libraries are crucial to the development of software projects. To get suitable libraries, developers need to search through millions of libraries by filtering, evaluating, and comparing. The vast number of libraries places a…

Software Engineering · Computer Science 2020-05-26 Zhensu Sun , Yan Liu , Ziming Cheng , Chen Yang , Pengyu Che

The fitting or parameter estimation of complex ecological models is a challenging optimisation task, with a notable lack of tools for fitting complex, long runtime or stochastic models. calibrar is an R package that is dedicated to the…

Quantitative Methods · Quantitative Biology 2024-04-30 Ricardo Oliveros-Ramos , Yunne-Jai Shin

Deep Reinforcement Learning (RL) can yield capable agents and control policies in several domains but is commonly plagued by prohibitively long training times. Additionally, in the case of continuous control problems, the applicability of…

Machine Learning · Computer Science 2024-11-20 Jonas Eschmann , Dario Albani , Giuseppe Loianno

This article is the result of the analysis of various bibliographic reference management tools, especially those that are free. The use of editorial tools by bibliographic editors has evolved rapidly since 2007. But, until recently, free…

Information Retrieval · Computer Science 2012-12-24 Gérald Kembellec , Claire Scopsi

The majority of automated machine learning (AutoML) solutions are developed in Python, however a large percentage of data scientists are associated with the R language. Unfortunately, there are limited R solutions available. Moreover high…

Machine Learning · Computer Science 2024-09-10 Hubert Ruczyński , Anna Kozak

Unlike traditional fact-based retrieval, rationale-based retrieval typically necessitates cross-encoding of query-document pairs using large language models, incurring substantial computational costs. To address this limitation, we propose…

Information Retrieval · Computer Science 2026-05-14 Teng Chen , Sheng Xu , Feixiang Guo , Xiaoyu Wang , Qingqing Gu , Hongyan Li , Luo Ji

Classification tasks in NLP are typically addressed by selecting a pre-trained language model (PLM) from a model hub, and fine-tuning it for the task at hand. However, given the very large number of PLMs that are currently available, a…

Computation and Language · Computer Science 2024-09-11 Lukas Garbas , Max Ploner , Alan Akbik

Citations allow quickly identifying related research. If multiple publications are selected as seeds, specific suggestions for related literature can be made based on the number of incoming and outgoing citation links to this selection.…

Human-Computer Interaction · Computer Science 2024-08-06 Fabian Beck

The rise of the programmable web offers new opportunities for the empirically driven social sciences. The access, compilation and preparation of data from the programmable web for statistical analysis can, however, involve substantial…

Computation · Statistics 2016-07-20 Ulrich Matter