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The stress tensor is calculated for dilute active suspensions composed of colloidal Janus particles propelled by self-diffusiophoresis and powered by a chemical reaction. The Janus particles are assumed to be spherical and made of catalytic…

Soft Condensed Matter · Physics 2026-01-21 Pierre Gaspard

A mesoscopic coarse-grain model for computationally-efficient simulations of biomembranes is presented. It combines molecular dynamics simulations for the lipids, modeled as elastic chains of beads, with multiparticle collision dynamics for…

Soft Condensed Matter · Physics 2015-06-04 Mu-Jie Huang , Raymond Kapral , Alexander S. Mikhailov , Hsuan-Yi Chen

Motivated by recent experiments, we consider the hydrodynamic capture of a microswimmer near a stationary spherical obstacle. Simulations of model equations show that a swimmer approaching a small spherical colloid is simply scattered. In…

Fluid Dynamics · Physics 2015-05-12 Saverio E. Spagnolie , Gregorio R. Moreno-Flores , Denis Bartolo , Eric Lauga

Multiparticle collision dynamics is a modern coarse-grained simulation technique to treat the hydrodynamics of Newtonian fluids by solving the Navier-Stokes equations. Naturally, it also includes thermal noise. Initially it has been applied…

Soft Condensed Matter · Physics 2018-05-17 Andreas Zöttl , Holger Stark

Hydrodynamical interactions of active micro-particles are pervasive in our planet's fluid environments. Hence, understanding the interactions of these self-propelled particles is essential for science and engineering. In this paper the…

Soft Condensed Matter · Physics 2022-12-28 Yonatan Ashenafi

Microorganisms living in microfluidic environments often form multi-species swarms, where they can leverage collective motions to achieve enhanced transport and spreading. Nevertheless, there is a general lack of physical understandings of…

Fluid Dynamics · Physics 2022-02-14 Bryce Palmer , Wen Yan , Tong Gao

We propose a minimal model of microswimmer based on immersed boundary methods. We describe a swimmer (either pusher or puller) as a distribution of point forces, representing the swimmer's flagellum and body, with only the latter subjected…

Computational Physics · Physics 2024-07-12 Francesco Michele Ventrella , Guido Boffetta , Massimo Cencini , Filippo De Lillo

Dense active matter, from bacterial suspensions and microtubule bundles driven by motor proteins to cellular monolayers and synthetic Janus particles, is characterised by mesoscale turbulence, the emergence of chaotic flow structures. By…

Soft Condensed Matter · Physics 2016-06-22 Sumesh P. Thampi , Amin Doostmohammadi , Tyler N. Shendruk , Ramin Golestanian , Julia M. Yeomans

We report on a comprehensive theory-simulation-experimental study of collective and self-diffusion in suspensions of charge-stabilized colloidal spheres. In simulation and theory, the spheres interact by a hard-core plus screened Coulomb…

Soft Condensed Matter · Physics 2018-04-13 Adolfo J. Banchio , Marco Heinen , Peter Holmqvist , Gerhard Nägele

We theoretically study the self-propulsion of a thin (slender) colloid driven by asymmetric chemical reactions on its surface at vanishing Reynolds number. Using the method of matched asymptotic expansions, we obtain the colloid…

Soft Condensed Matter · Physics 2018-03-21 Yahaya Ibrahim , Ramin Golestanian , Tanniemola B. Liverpool

Using multiparticle collision dynamics simulations, we investigate the swimming dynamics, orientational behavior, and hydrodynamic interactions of a model swimmer designed to mimic the isolated flagellar apparatus ($FA$) of Chlamydomonas…

Biological Physics · Physics 2025-07-01 Sai Venkata Ramana Ambadipudi , Albert Bae , Azam Gholami

We consider a suspension of active rigid particles (swimmers) in a steady Stokes flow, where particles are distributed according to a stationary ergodic random process, and we study its homogenization in the macroscopic limit. A key point…

Analysis of PDEs · Mathematics 2023-03-15 Armand Bernou , Mitia Duerinckx , Antoine Gloria

Motivated by recent simulations and by experiments on aggregation of gliding bacteria, we study a model of the collective dynamics of self-propelled hard rods on a substrate in two dimensions. The rods have finite size, interact via…

Soft Condensed Matter · Physics 2009-11-13 Aparna Baskaran , M. Cristina Marchetti

Hydrophobic interactions are central to biological self-assembly and soft matter organization, yet their microscopic origins remain debated. A key hallmark is the strengthening of attraction between hydrophobic solutes with increasing…

Soft Condensed Matter · Physics 2025-09-25 Nigel B. Wilding , Francesco Turci

Design strategies to assemble dissipative building blocks are essential to create novel and smart materials and machines. We recently demonstrated the hierarchical self-assembly of phoretic microswimmers into self-spinning microgears and…

Soft Condensed Matter · Physics 2019-09-26 Antoine Aubret , Jérémie Palacci

We study experimentally-using Janus colloids-and theoretically-using Active Brownian Particles- the sedimentation of dilute active colloids. We first confirm the existence of an exponential density profile. We show experimentally the…

Soft Condensed Matter · Physics 2018-11-14 Felix Ginot , Alexandre Solon , Yariv Kafri , Christophe Ybert , Julien Tailleur , Cecile Cottin-Bizonne

The design of artificial microswimmers is often inspired by the strategies of natural microorganisms. Many of these creatures exploit the fact that elasticity breaks the time-reversal symmetry of motion at low Reynolds numbers, but this…

Spermatozoa flagella are known to synchronize when swimming in close proximity. We use a model consisting of two-dimensional sheets propagating transverse waves of displacement to demonstrate that fluid forces lead to such synchronization…

Fluid Dynamics · Physics 2011-08-30 Gwynn J. Elfring , Eric Lauga

We derive macroscopic dynamics for self-propelled particles in a fluid. The starting point is a coupled Vicsek-Stokes system. The Vicsek model describes self-propelled agents interacting through alignment. It provides a phenomenological…

Fluid Dynamics · Physics 2017-06-20 Pierre Degond , Sara Merino-Aceituno , Fabien Vergnet , Hui Yu

We study the effects of heterogeneity on interfacial pinning and hydrodynamic drag using molecular dynamics (MD) simulations of Janus nanospheres at a liquid/vapor interface. We construct the free energy landscape for this system, both in…

Soft Condensed Matter · Physics 2019-04-17 Joel Koplik , Charles Maldarelli