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Pyrosequencing is among the emerging sequencing techniques, capable of generating upto 100,000 overlapping reads in a single run. This technique is much faster and cheaper than the existing state of the art sequencing technique such as…

Genomics · Quantitative Biology 2016-09-08 Fahad Saeed , Ashfaq Khokhar , Osvaldo Zagordi , Niko Beerenwinkel

Existing metrics in competing risks survival analysis such as concordance and accuracy do not evaluate a model's ability to jointly predict the event type and the event time. To address these limitations, we propose a new metric, which we…

Methodology · Statistics 2019-08-20 Kartik Ahuja , Mihaela van der Schaar

Audio-to-score alignment is a long-standing challenge in music information retrieval and arguably the most widely applicable alignment task for music research. Alignment algorithms match two versions of a piece of music, and for this to…

Sound · Computer Science 2026-05-20 Silvan Peter , Patricia Hu , Gerhard Widmer

Large music content libraries often comprise multiple versions of a piece of music. To establish a link between different versions, automatic music alignment methods map each position in one version to a corresponding position in another…

Sound · Computer Science 2016-10-11 Siying Wang , Sebastian Ewert , Simon Dixon

In various data settings, it is necessary to compare observations from disparate data sources. We assume the data is in the dissimilarity representation and investigate a joint embedding method that results in a commensurate representation…

Methodology · Statistics 2016-01-05 Sancar Adali , Carey E. Priebe

This paper considers the matrix completion problem. We show that it is not necessary to assume joint incoherence, which is a standard but unintuitive and restrictive condition that is imposed by previous studies. This leads to a sample…

Information Theory · Computer Science 2016-11-15 Yudong Chen

In this work, we present a new iterative exact solution algorithm for the weighted fair sequences problem, which is a recently introduced NP-hard sequencing problem with applications in diverse areas such as TV advertisement scheduling,…

Optimization and Control · Mathematics 2021-08-09 Markus Sinnl

Entity alignment is to find identical entities in different knowledge graphs. Although embedding-based entity alignment has recently achieved remarkable progress, training data insufficiency remains a critical challenge. Conventional…

Artificial Intelligence · Computer Science 2022-03-15 Kexuan Xin , Zequn Sun , Wen Hua , Bing Liu , Wei Hu , Jianfeng Qu , Xiaofang Zhou

Hypergraph matching has recently become a popular approach for solving correspondence problems in computer vision as it allows to integrate higher-order geometric information. Hypergraph matching can be formulated as a third-order…

Computer Vision and Pattern Recognition · Computer Science 2016-11-17 Quynh Nguyen , Francesco Tudisco , Antoine Gautier , Matthias Hein

A widely used method for determining the similarity of two labeled trees is to compute a maximum agreement subtree of the two trees. Previous work on this similarity measure is only concerned with the comparison of labeled trees of two…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Hing-Fung Ting

Combining information from different sources is a common way to improve classification accuracy in Brain-Computer Interfacing (BCI). For instance, in small sample settings it is useful to integrate data from other subjects or sessions in…

Machine Learning · Statistics 2013-10-24 Wojciech Samek , Alexander Binder , Klaus-Robert Müller

Multiple rotation averaging plays a crucial role in computer vision and robotics domains. The conventional optimization-based methods optimize a nonlinear cost function based on certain noise assumptions, while most previous learning-based…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Shiqi Li , Jihua Zhu , Yifan Xie , Naiwen Hu , Mingchen Zhu , Zhongyu Li , Di Wang

The multimodal relevance metric is usually borrowed from the embedding ability of pretrained contrastive learning models for bimodal data, which is used to evaluate the correlation between cross-modal data (e.g., CLIP). However, the…

Computer Vision and Pattern Recognition · Computer Science 2025-09-29 Zhicheng Du , Qingyang Shi , Jiasheng Lu , Yingshan Liang , Xinyu Zhang , Yiran Wang , Peiwu Qin

We consider the problem of subset selection where one is given multiple rankings of items and the goal is to select the highest ``quality'' subset. Score functions from the multiwinner voting literature have been used to aggregate rankings…

Computers and Society · Computer Science 2023-06-19 Niclas Boehmer , L. Elisa Celis , Lingxiao Huang , Anay Mehrotra , Nisheeth K. Vishnoi

We study a natural generalization of the maximum weight many-to-one matching problem. We are given an undirected bipartite graph $G= (A \cup P, E)$ with weights on the edges in $E$, and with lower and upper quotas on the vertices in $P$. We…

Discrete Mathematics · Computer Science 2016-03-29 Ashwin Arulselvan , Ágnes Cseh , Martin Groß , David F. Manlove , Jannik Matuschke

The efficient solution of large-scale multiterm linear matrix equations is a challenging task in numerical linear algebra, and it is a largely open problem. We propose a new iterative scheme for symmetric and positive definite operators,…

Numerical Analysis · Mathematics 2025-05-27 Davide Palitta , Martina Iannacito , Valeria Simoncini

Joining records with all other records that meet a linkage condition can result in an astronomically large number of combinations due to many-to-many relationships. For such challenging (acyclic) joins, a random sample over the join result…

Databases · Computer Science 2022-01-11 Michael Shekelyan , Graham Cormode , Peter Triantafillou , Ali Shanghooshabad , Qingzhi Ma

A variety of methods have been proposed for structure similarity calculation, which are called structure alignment or superposition. One major shortcoming in current structure alignment algorithms is in their inherent design, which is based…

Quantitative Methods · Quantitative Biology 2013-07-31 Xuefeng Cui , Shuai Cheng Li , Dongbo Bu , Ming Li

We demonstrate a method to optimize the combination of distinct components in a paragraph retrieval system. Our system makes use of several indices, query generators and filters, each of them potentially contributing to the quality of the…

Information Retrieval · Computer Science 2014-08-12 Boris Iolis , Gianluca Bontempi

We count the number of alignments of $N \ge 1$ sequences when match-up types are from a specified set $S\subseteq \mathbb{N}^N$. Equivalently, we count the number of nonnegative integer matrices whose rows sum to a given fixed vector and…

Combinatorics · Mathematics 2016-07-26 Steffen Eger
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