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Recent work shows how offset-value coding speeds up database query execution, not only sorting but also duplicate removal and grouping (aggregation) in sorted streams, order-preserving exchange (shuffle), merge join, and more. It already…

Databases · Computer Science 2023-02-20 Goetz Graefe , Thanh Do

Motivation: The comparison of diverse genomic datasets is fundamental to understanding genome biology. Researchers must explore many large datasets of genome intervals (e.g., genes, sequence alignments) to place their experimental results…

Genomics · Quantitative Biology 2012-08-20 Ryan M. Layer , Kevin Skadron , Gabriel Robins , Ira M. Hall , Aaron R. Quinlan

This article introduces hinted dictionaries for expressing efficient ordered sets and maps functionally. As opposed to the traditional ordered dictionaries with logarithmic operations, hinted dictionaries can achieve better performance by…

Programming Languages · Computer Science 2022-06-10 Amir Shaikhha , Mahdi Ghorbani , Hesam Shahrokhi

Set intersection is the core in a variety of problems, e.g. frequent itemset mining and sparse boolean matrix multiplication. It is well-known that large speed gains can, for some computational problems, be obtained by using a graphics…

Data Structures and Algorithms · Computer Science 2011-02-07 Rasmus Resen Amossen , Rasmus Pagh

With rapidly increasing data, clustering algorithms are important tools for data analytics in modern research. They have been successfully applied to a wide range of domains; for instance, bioinformatics, speech recognition, and financial…

Data Structures and Algorithms · Computer Science 2015-12-01 Ka-Chun Wong

The driving force in the pursuit for quantum computation is the exciting possibility that quantum algorithms can be more efficient than their classical analogues. Research on the subject has unraveled several aspects of how that can happen.…

Quantum Physics · Physics 2011-02-11 Apoorva Patel

Associative memories are data structures addressed using part of the content rather than an index. They offer good fault reliability and biological plausibility. Among different families of associative memories, sparse ones are known to…

Neural and Evolutionary Computing · Computer Science 2013-08-22 Ala Aboudib , Vincent Gripon , Xiaoran Jiang

Cluster analysis faces two problems in high dimensions: first, the `curse of dimensionality' that can lead to overfitting and poor generalization performance; and second, the sheer time taken for conventional algorithms to process large…

Quantitative Methods · Quantitative Biology 2013-09-12 Shabnam N. Kadir , Dan F. M. Goodman , Kenneth D. Harris

Quantized Indexing is a fast and space-efficient form of enumerative (combinatorial) coding, the strongest among asymptotically optimal universal entropy coding algorithms. The present advance in enumerative coding is similar to that made…

Information Theory · Computer Science 2016-11-18 Ratko V. Tomic

We explore various techniques to compress a permutation $\pi$ over n integers, taking advantage of ordered subsequences in $\pi$, while supporting its application $\pi$(i) and the application of its inverse $\pi^{-1}(i)$ in small time. Our…

Data Structures and Algorithms · Computer Science 2009-02-09 Jérémy Barbay , Gonzalo Navarro

On modern architectures, the performance of 32-bit operations is often at least twice as fast as the performance of 64-bit operations. By using a combination of 32-bit and 64-bit floating point arithmetic, the performance of many dense and…

Mathematical Software · Computer Science 2015-05-13 Marc Baboulin , Alfredo Buttari , Jack Dongarra , Jakub Kurzak , Julie Langou , Julien Langou , Piotr Luszczek , Stanimire Tomov

In this paper we propose an index key compression scheme based on the notion of distinction bits by proving that the distinction bits of index keys are sufficient information to determine the sorted order of the index keys correctly. While…

Databases · Computer Science 2020-09-25 Yongsik Kwon , Cheol Ryu , Sang Kyun Cha , Arthur H. Lee , Kunsoo Park , Bongki Moon

Specific data compression techniques, formalized by the concept of coresets, proved to be powerful for many optimization problems. In fact, while tightly controlling the approximation error, coresets may lead to significant speed up of the…

Optimization and Control · Mathematics 2022-04-05 Maximilian Fiedler , Peter Gritzmann , Fabian Klemm

This paper presents a novel method for efficient image retrieval, based on a simple and effective hashing of CNN features and the use of an indexing structure based on Bloom filters. These filters are used as gatekeepers for the database of…

Multimedia · Computer Science 2016-05-04 Andrea Salvi , Simone Ercoli , Marco Bertini , Alberto Del Bimbo

This work addresses the problem of billion-scale nearest neighbor search. The state-of-the-art retrieval systems for billion-scale databases are currently based on the inverted multi-index, the recently proposed generalization of the…

Computer Vision and Pattern Recognition · Computer Science 2018-07-24 Dmitry Baranchuk , Artem Babenko , Yury Malkov

We examine the efficiency of clustering a set of points, when the encompassing metric space may be preprocessed in advance. In computational problems of this genre, there is a first stage of preprocessing, whose input is a collection of…

Data Structures and Algorithms · Computer Science 2012-08-28 Tsvi Kopelowitz , Robert Krauthgamer

Performance of clustering algorithms is evaluated with the help of accuracy metrics. There is a great diversity of clustering algorithms, which are key components of many data analysis and exploration systems. However, there exist only few…

Data Structures and Algorithms · Computer Science 2019-02-18 Artem Lutov , Mourad Khayati , Philippe Cudré-Mauroux

We investigate coresets - succinct, small summaries of large data sets - so that solutions found on the summary are provably competitive with solution found on the full data set. We provide an overview over the state-of-the-art in coreset…

Machine Learning · Statistics 2017-06-06 Olivier Bachem , Mario Lucic , Andreas Krause

We present bundled references, a new building block to provide linearizable range query operations for highly concurrent linked data structures. Bundled references allow range queries to traverse a path through the data structure that is…

Data Structures and Algorithms · Computer Science 2021-01-01 Jacob Nelson , Ahmed Hassan , Roberto Palmieri

Seismic inversion and imaging are adjoint-based optimization problems that process up to terabytes of data, regularly exceeding the memory capacity of available computers. Data compression is an effective strategy to reduce this memory…

Computational Engineering, Finance, and Science · Computer Science 2021-09-21 Navjot Kukreja , Jan Hueckelheim , Mathias Louboutin , Fabio Luporini , Paul Hovland , Gerard Gorman